Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00511 ATGGCTACTGATAGAATTTTCAAGCCTTCCAAGTGGTTCTCCAACAAAACTCTTAGGTTAAGCCTTCATCGCCCAACATCAAGATCCTCCAACTCATCATCACATTCATCAAGTGCTTCTCCACGTTCCCCCATGTCAACATGCACATCCCCAAAGAAGGAAGAGGTCAACGGCCTCATGGAAGCTTTTCATTACTTTGATGGTGATGGAGATGGGAAAATCTCGGCCTATGATCTAAGGTCGTATTTTGGGTCCATTGGGGAGCACATGTCTCATCAGGAGGTTGAAGGGGTGATCCATGACCTCGATTCCGATGGGGATAACATGTTGGACTTGCAGGATTTCACCAAGCTGGTGAAGAGGGGTGGTGGTGATGGCGATGAGGGGGATCTAAGAAAGGCTTTTGAGATGTTTGTGTGGGAGAAAGAAGGGTGTGGTTGCATCACCCCAAAGGGGTTGCAGAGGATGTTGCACCGTCTTGGAGATGACAGATCCTATGACGAGTGTGTTGCCATGATCGGTGCCTTTGACATTGATCACAATGGTGTCCTTGATTTCGATGAGTTTTACCAAATGATGGCTTAG 585 0.4735 MATDRIFKPSKWFSNKTLRLSLHRPTSRSSNSSSHSSSASPRSPMSTCTSPKKEEVNGLMEAFHYFDGDGDGKISAYDLRSYFGSIGEHMSHQEVEGVIHDLDSDGDNMLDLQDFTKLVKRGGGDGDEGDLRKAFEMFVWEKEGCGCITPKGLQRMLHRLGDDRSYDECVAMIGAFDIDHNGVLDFDEFYQMMA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00511 194 ProSitePatterns EF-hand calcium-binding domain. 103 115 IPR018247 -
Phco8g00511 194 MobiDBLite consensus disorder prediction 21 52 - -
Phco8g00511 194 ProSiteProfiles EF-hand calcium-binding domain profile. 164 194 IPR002048 GO:0005509
Phco8g00511 194 ProSitePatterns EF-hand calcium-binding domain. 67 79 IPR018247 -
Phco8g00511 194 SMART efh_1 168 194 IPR002048 GO:0005509
Phco8g00511 194 SMART efh_1 94 122 IPR002048 GO:0005509
Phco8g00511 194 SMART efh_1 58 86 IPR002048 GO:0005509
Phco8g00511 194 Gene3D - 26 122 - -
Phco8g00511 194 Pfam EF-hand domain pair 146 193 IPR002048 GO:0005509
Phco8g00511 194 SUPERFAMILY EF-hand 42 193 IPR011992 -
Phco8g00511 194 ProSiteProfiles EF-hand calcium-binding domain profile. 54 89 IPR002048 GO:0005509
Phco8g00511 194 Pfam EF-hand domain pair 59 119 IPR002048 GO:0005509
Phco8g00511 194 PANTHER CALCIUM BINDING PROTEIN 110 193 - -
Phco8g00511 194 Gene3D - 123 194 - -
Phco8g00511 194 CDD EFh 131 194 IPR002048 GO:0005509
Phco8g00511 194 FunFam Calmodulin-2 A 49 194 - -
Phco8g00511 194 CDD EFh 59 120 IPR002048 GO:0005509
Phco8g00511 194 ProSitePatterns EF-hand calcium-binding domain. 177 189 IPR018247 -
Phco8g00511 194 ProSiteProfiles EF-hand calcium-binding domain profile. 90 125 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00511 Phco-Chr8 5029099 5029683 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00511 8 5029099 5029683 Phco8g00511 8 5029099 5029683 ECH