Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00487 ATGTCGCCAGACTCCTTCCACATCTTCATTCTCACCAGGTGGAAGCTGGTGCGTTTGGTGGACACCATGTTCCTTCTTAGAAGGCAAGGCCAGAATCAGCTGGAGATTGATTCCTCAAAACAAGATACAAAGGTGAATGAACTCAGGGCTGCTCTTGGGCCCCTCTCTGGTCGTCGACTACTGTATTGCACAGAGGCATGTCTAAGGAGATATTTAGAAGCAAGGAATTGGAATGTTGATAAAGCAAAGAAAATGCTGGAGGAAACACTCAAGTGGAGGGCAACTTATAGGCCAGAAGAAATTCGTTGGGCTGAAGTAGCACATGAGGGTGAGACAGGTAAAGTCTCCAGGGCTAACTTTCATGATCGACATGGGAGGACTGTGCTTATTTTGAGGCCAGGAATGCAGAACACAACATCAGCTGAAGATAATATCAGGCATTTAGTCTATCTATTGGAAAATGCTATCCTAAATCTTTCAGAAGGTCAAGAACAAATGTCGTGGTTGATAGACTACACAGGATTATCACTTAATACGAATATGTCTCTTAAAACAGCTCGTGATATTATTTACATTTTACAAAACCACTATCCAGAAAGGCTTGCTATTGCTTTTCTGTACAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCCGTCAAGTTCTTCCTGGATCCCAAGACAGTCCAGAAGGTGAAATTTGTTTATCCCAATAATAAGGAGAGTGTGGAGCTAATGCAATCACTCTTCGAACAAGATAACCTTCCAAGTGAATTTGGGGGGAAAACAAGTTTAATGTATGATCATGAAGAGTTCTCACGGTTGATGACTGAGGATGATGTGAAAACTGCAAAGTTCTGGGGACTTGACGAGAAGCCTTTTAACCCTCCTAAGAAAGGCCATGCTGGAGCAGAGGTGGCACCAGAACCCGTGTCTGTTCAGACAGTAGTTAGTTAG 957 0.4316 MSPDSFHIFILTRWKLVRLVDTMFLLRRQGQNQLEIDSSKQDTKVNELRAALGPLSGRRLLYCTEACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNMSLKTARDIIYILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFEQDNLPSEFGGKTSLMYDHEEFSRLMTEDDVKTAKFWGLDEKPFNPPKKGHAGAEVAPEPVSVQTVVS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00487 318 Pfam CRAL/TRIO, N-terminal domain 59 88 IPR011074 -
Phco8g00487 318 SUPERFAMILY CRAL/TRIO domain 104 279 IPR036865 -
Phco8g00487 318 PANTHER GH16843P 33 292 - -
Phco8g00487 318 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 103 267 IPR001251 -
Phco8g00487 318 SUPERFAMILY CRAL/TRIO N-terminal domain 32 104 IPR036273 -
Phco8g00487 318 CDD SEC14 121 262 IPR001251 -
Phco8g00487 318 PRINTS Cellular retinaldehyde-binding protein signature 184 205 - -
Phco8g00487 318 PRINTS Cellular retinaldehyde-binding protein signature 67 89 - -
Phco8g00487 318 PRINTS Cellular retinaldehyde-binding protein signature 253 262 - -
Phco8g00487 318 SMART sec14_4 109 264 IPR001251 -
Phco8g00487 318 Pfam CRAL/TRIO domain 115 261 IPR001251 -
Phco8g00487 318 FunFam Phosphatidylinositol transfer protein 3 25 295 - -
Phco8g00487 318 SMART CRAL_TRIO_N_2 64 89 IPR011074 -
Phco8g00487 318 Gene3D - 22 292 IPR036865 -
Phco8g00487 318 MobiDBLite consensus disorder prediction 296 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00487 Phco-Chr8 4601271 4604993 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00487 8 4601271 4604993 Phco8g00487 8 4601271 4604993 ECH