Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00480 ATGGTGAACCTTGTGGCAGCGCAGAGGCCATTGCTGCATGGGCTAATGAAGATGGCGGGGATCAGGCCGTACACGGTGGAGATTGAGCCCGGGACCGTGATGAGTTTCTGGGTCCCTTCTGAGACCATAACGAAGCCGAAGAAAAAGGAGGAAAAGCCCAAAATTATAGCGAAGCCCAGCAAGCCCACGGTGGTTCTGGTGCACGGTTTCGCGGGGGAAGGAATCGTGACGTGGCAGTTCCAAGTGGGGGCGTTGACGAAAAAGTACGCTGTTTATGTTCCTGATCTTCTCTTCTTCGGAGGGTCTGCCACCGATAAAGCGGAGAGATCGCCAAGGTTTCAAGCGGAGTGTTTGGTGAGGGCGTTAAGGAAACTTGGGGTGGAGAAATGCATGGTGGTTGGGTTCAGTTATGGGGGAATGGTGGCGTTTAAGATGGCTGAGATGTGGCCTGAAATGGTTGAAGGCATGGTTATTTCTGGTTCCATTTTGGCCATGACGGACTCACTGAGCGCCAACTCGCTGCAAGACATTGGGTTCTCTTCTTCTTCGGATCTCTTGCTGCCTAACTCTGTTAAGGGTCTTAAGGCCCTCCTGTCCGTCGCTGCTCACAAAAAACTCTGGTTTCCCAATCGTTTGCACAGAGATTTTCTCCAGGTGATGTTTACGAATAGAAAGGAACGGGGTGAATTATTGGAGGGCTTAGTAGTTGACAACAAAGATATCGCCATCCACAATTTTCCACAGAGAATACATCTTTTATGGGGCCAGAATGATCAAATTTTCAAAGTGGAGCTTGCAGAAAATATGAAAGAAGAACTAGGGGATGGCACAACCCTTGAATGCATAGAGAAAGCTGGTCACCTGGTTCACCTGGAGCGACCCTGTGTCTTCAATAGATGCCTCAAGCACTTTCTTGCTTCCTTCTTTGCCAATAATCATTAA 942 0.4904 MVNLVAAQRPLLHGLMKMAGIRPYTVEIEPGTVMSFWVPSETITKPKKKEEKPKIIAKPSKPTVVLVHGFAGEGIVTWQFQVGALTKKYAVYVPDLLFFGGSATDKAERSPRFQAECLVRALRKLGVEKCMVVGFSYGGMVAFKMAEMWPEMVEGMVISGSILAMTDSLSANSLQDIGFSSSSDLLLPNSVKGLKALLSVAAHKKLWFPNRLHRDFLQVMFTNRKERGELLEGLVVDNKDIAIHNFPQRIHLLWGQNDQIFKVELAENMKEELGDGTTLECIEKAGHLVHLERPCVFNRCLKHFLASFFANNH 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00480 313 PANTHER SI:DKEY-122A22.2 1 306 - -
Phco8g00480 313 PRINTS Alpha/beta hydrolase fold signature 132 145 IPR000073 -
Phco8g00480 313 PRINTS Alpha/beta hydrolase fold signature 250 264 IPR000073 -
Phco8g00480 313 PRINTS Alpha/beta hydrolase fold signature 88 103 IPR000073 -
Phco8g00480 313 PRINTS Alpha/beta hydrolase fold signature 146 159 IPR000073 -
Phco8g00480 313 Pfam alpha/beta hydrolase fold 62 294 IPR000073 -
Phco8g00480 313 SUPERFAMILY alpha/beta-Hydrolases 59 306 IPR029058 -
Phco8g00480 313 Gene3D alpha/beta hydrolase 54 309 IPR029058 -
Phco8g00480 313 PRINTS Epoxide hydrolase signature 146 159 IPR000639 GO:0003824
Phco8g00480 313 PRINTS Epoxide hydrolase signature 132 145 IPR000639 GO:0003824
Phco8g00480 313 PRINTS Epoxide hydrolase signature 88 103 IPR000639 GO:0003824
Phco8g00480 313 PRINTS Epoxide hydrolase signature 282 304 IPR000639 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00480 Phco-Chr8 4555065 4561798 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00480 8 4555065 4561798 Phco4g00966 4 7635111 7635449 ECH
Phco8g00480 8 4555065 4561798 Phco8g00480 8 4555065 4561798 ECH
Phco4g00966 4 7635111 7635449 Phco8g00480 8 4555065 4561798 PCT