Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00456 ATGGAATTTGCTAGTTTCCATCTTCAGCATCAGCTTCAAGAAGAATCTGCTCAGTGTATAACTTCAGCAACACCACCACCTGACTCTACACTTTCCATTACCACTAGTCAATCATGGATGCCAAGCAACATGTACAATGGTTGTAACAGTGGCTTTCTAACTGAGAGCTTTACAAATTCAAGAGAACTACAGCACAAGCACGCCATGACTGATTCACTTAGAATTTCAACAAGGCAAGCCTTTGGTTTCCACAATGGAAAAAGCCTCGCTCAACAGCCAGTTAGTGATCTCTTTCCAGCAAGAATGAGAGGTGAAATGATCAACACCTCCATGAAGGCTATGGAGGAATCATGTTCACTAATCCCAGTTCATGAACCACGATATCCTCCTAGTTTCTTATCTAGTCTTGGTGTAACTGGTCCAGAGTTTGTTCCTGCGGCGAATGTCTTTCATAATAACAAGTCTAATGATGGAAGGACACAAAGCAAGAGATATAACAACTTTGGCGATGCTAGCTTAATTTTCAATTTACCAACCCTAGATATGACCTCTTCCTTGGTTTCATGCTCTTTGGGTTTAAATCCTAAAATGTTTGATCTGCATACAAGTTATAGTGAGAGTTGTGAAATCCAACCTTGCTATGATACTTTTGGTCTAAACGAGAGCATAGCTTTGTGCCATAGTGACATGCATGGCAGCGAAAATAGTCCATCAAGTAGCACAAAAATTTCATCGTTTAGAAGTGAAGTTGCAACAACAAAAAGGCCAAGCAATTGCTCTCTACCAAAAGAATCTGAGGGCAAAGCTAAGAAGTCAAGGCCATCACCATGCCCTCCCCTGAAGCAGATAAGAAAGGAAAAATTGGGGGATAGGATTCAAACTCTTCAAAGATTAGTGGCACCTTTTGGGAAGACCAGTACAGCCTCTGTCTTAAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAATCCACGCAAAGCAATAGAATGTTGCAGCTGGTAAGACATGCATATACTATAGGTAGCAAAGAACTGAAGACAGACCTAAGAAGCAGAGGCTTGTGTCTTGTGCCCTTTTCTTACGCATCATTTATTCATCGTTGTGTTTAG 1143 0.4112 MEFASFHLQHQLQEESAQCITSATPPPDSTLSITTSQSWMPSNMYNGCNSGFLTESFTNSRELQHKHAMTDSLRISTRQAFGFHNGKSLAQQPVSDLFPARMRGEMINTSMKAMEESCSLIPVHEPRYPPSFLSSLGVTGPEFVPAANVFHNNKSNDGRTQSKRYNNFGDASLIFNLPTLDMTSSLVSCSLGLNPKMFDLHTSYSESCEIQPCYDTFGLNESIALCHSDMHGSENSPSSSTKISSFRSEVATTKRPSNCSLPKESEGKAKKSRPSPCPPLKQIRKEKLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKSTQSNRMLQLVRHAYTIGSKELKTDLRSRGLCLVPFSYASFIHRCV 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00456 380 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 280 338 IPR036638 GO:0046983
Phco8g00456 380 MobiDBLite consensus disorder prediction 230 283 - -
Phco8g00456 380 MobiDBLite consensus disorder prediction 230 260 - -
Phco8g00456 380 CDD bHLH_AtbHLH_like 284 329 IPR045239 -
Phco8g00456 380 SMART finulus 278 327 IPR011598 GO:0046983
Phco8g00456 380 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 98 374 - -
Phco8g00456 380 Gene3D - 280 346 IPR036638 GO:0046983
Phco8g00456 380 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 272 321 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00456 Phco-Chr8 4274004 4277264 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00456 8 4274004 4277264 Phco8g00456 8 4274004 4277264 ECH