Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00448 ATGTCAACTGAAGCGCCCAAGCGCCATCAATGGCAGTGGGAGAACGCCGCCGCCGGCGCTGCCGCTGGATTCGCCACCGTTGCCATTATGTATCCCCTCGATGTTGTCCGCACTAGGTTTCAAGTTAACGATGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGCTCACGCCGTTTTCACCATTGCTCGCTCCGAGGGATTAAGAGGGTTATATGCGGGCTTTCTTCCTGGGACTCTCGGGTCCACTATTTCATGGGGTTTATATTTCTTTTTCTATGATAAAGCCAAACAAAGATACGCAAGGAACAGGGAGGGGAAATTGAGTCCAGGTCTTCATCTTGCCTCGGCTGCTGAAGCGGGAGGTTTGGTTTGCCTGTGCACAAATCCTGTTTGGCTTGTAAAGACAAGATTACAGCTTCAAACTCAGCTCCATCAGACGCGACCATACACTGGGCTTTGTGATGCATTTAGGACCATAACGAGGGAAGAGGGATTTAGTGCACTTTACAGAGGCATTGTTCCTGGCCTATTTCTGCAGGTCTCTCATGGTGCTATTCAATTCACAGCATATGAGGAGCTACGTAAAGTTATTATTGATTTTAAGAGTAAGAGAAGTACATTATTACATAATCAAAGTTCTGATAAATTGTTGAATTCTGTTGATTATGCTGTTCTTGGAGCAACATCAAAACTAGCTGCAATGCTGCTAACCTATCCATTTCAGGTTATGCGGTCTCGCTTGCAGCAACGACCTAGTGGTGATGGGGTTCTAAGATATATGGACACTTGGCATGTTGTGAAAGAAACTGCACGATTTGAAGGTATCCGGGGTTTTTACAAAGGAATTACTGCAAACCTCTTGAAAAATGCTCCTGCTTCTTCAATAACATTTATTGTTTATGAAAATGTTATAAAATTGCTTAAACCGACTATAAGGAATGACTGA 951 0.4427 MSTEAPKRHQWQWENAAAGAAAGFATVAIMYPLDVVRTRFQVNDGRVSHLPSYKNTAHAVFTIARSEGLRGLYAGFLPGTLGSTISWGLYFFFYDKAKQRYARNREGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTQLHQTRPYTGLCDAFRTITREEGFSALYRGIVPGLFLQVSHGAIQFTAYEELRKVIIDFKSKRSTLLHNQSSDKLLNSVDYAVLGATSKLAAMLLTYPFQVMRSRLQQRPSGDGVLRYMDTWHVVKETARFEGIRGFYKGITANLLKNAPASSITFIVYENVIKLLKPTIRND 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00448 316 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 12 311 IPR044712 GO:0006862|GO:0055085
Phco8g00448 316 Pfam Mitochondrial carrier protein 222 310 IPR018108 -
Phco8g00448 316 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Phco8g00448 316 Pfam Mitochondrial carrier protein 11 104 IPR018108 -
Phco8g00448 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 219 308 IPR018108 -
Phco8g00448 316 SUPERFAMILY Mitochondrial carrier 12 304 IPR023395 -
Phco8g00448 316 Gene3D Mitochondrial carrier domain 1 105 IPR023395 -
Phco8g00448 316 Gene3D Mitochondrial carrier domain 106 311 IPR023395 -
Phco8g00448 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Phco8g00448 316 FunFam Folate transporter 1, chloroplastic 106 314 - -
Phco8g00448 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Phco8g00448 316 FunFam folate transporter 1, chloroplastic isoform X1 1 105 - -
Phco8g00448 316 PRINTS Mitochondrial carrier protein signature 73 91 IPR002067 GO:0055085
Phco8g00448 316 PRINTS Mitochondrial carrier protein signature 25 43 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00448 Phco-Chr8 4200527 4208158 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00448 8 4200527 4208158 Phco8g00448 8 4200527 4208158 ECH