Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00440 ATGGACCCCGTGGAGGTTCTCCCTCCCTGGGTTCCAGAAGATGACCTTCTCCTCAAAAACGCCGTTGAGGCTGGTGCTTCCCTGGAATCGCTGGCAAGAGGAGCCGTGCGGTTCTCGCGGCGGTACTCCTTTAGGGAATTGCAAGATCGGTGGCTGTCTTTGCTCTACGACGTGGATGTTTCCACCAAGGCGGCCCTTGCCATGAGGAATTTGGAGCTGGCCAAGTCAGCTGCTACCGGTGGCGAAGGAAGTGGCAGTGGTGGGGGGGAGAAGAGGAAATTTCAAAGCAGTGGTGGTGTTGGGAAAAAGATTAAATTCCAAAGCGTTCGCAAGCAGTACTGCACCATGCAGAAAAAACTTCGCCGGCACTGCAGCAGCGTCATGTCTTCCAAGGTAAAGAACGGGGTGGTGGGGTGTGAGGGAAAAGAGAATGTGGTGGTTGACGGTAATTTAAATAGTGATGTTGTGAACAGTAAGGCAGTTGGTTATGGGAATTGCTTGGGGTCAGAGGAGGTAGAGGCAGGGCAATTGAGTGATTTGGTGAGCGATGTACCTCTGTGGAAAACGATTGAGGATGTTTGTTTGCCTGATGTGCCTGTTCATGTTAGTGTTGAGGGTAAAAGTTGTGGTTCTGAAGGGGGAGTGGATTTGAAAGATGAGTGTGGGAATGGGGGGTTGAAATTAAATGCTCCTGATGCCGAAAGTCTCCTGAACTTGGCAAATGAGGATGCAGTTCTCTTTGTGAATATAGAGGGGAAGGAGGTAATGGCTATGGATAAGAATAAGGATAAGCCGTGTTATGATAATGTTGATTCACTTCTGTTGAGTTCTTCTGGTGATGTTAGTGAATTGCAGAAGTTGGATGTGGAAGCAAAAATTTCTGTGCCCTGTGGGTGTGCTTCTGATGGGATGGGAATTGCAGCTAATCCATTAGGTGGCAGTTGTGGTGATCAGCATTTCGTTTCTGATCCTAGAAACAATGCTACATTGTCAGCTGTAGCAAAAAGTCCTCACCCTGAACACAGTGAGGGATTTATGATCTGTGTGTTGAATACTGAGCACCCTGATATCCCATGCAATGCTAATATGGATCTATCCGTTGTAATTCCTGAATTACCAGCTCTGAAATCCCAACCAGTTGCTAAAGAGGTGGGTTTTTCAGAATCTGCTATTAGTAATCAAAGAAGAAATGAACCAGATGGAAGCCTGAAGAAAGAAGCCGTTCTTTCTCAGTCTTTTGCTGCTTCACAAACTGGTCGACAAGAATCAGTGCCTAATGTGAATTCAAGCTCCAAACCTGTTGTTTTTGGACTAAAAAGTGAAAATCCTGGAAGAAACTCTATCTCTGCAGTTTCTAGACAGAATAACAATGTTGATGTCAACCCAAGTCATGGCAGACCAGTTCGTTCAAATGTGATTTATGGACATCTGAAACAAGAGGATATTGACGCACCAGCTACTGCACATGTTAAGGCTGAGGAACATAAAGCTTTATCAAAATCAGAAGCAAAATCGTTATCAGGAGGTAATATTGAAGATGATGATGAAGACTATAATGATGATGATTATGATGATGATGAACTTCCTAACTTTTCTGATGTGGAGACAATGATTCTTGAAATGGATTTATCTCCAATGGATGAAGATCCAAATGCAAGGAGAGAAGTATTGAGATATCAACATGAAGAAAGTAGGAAGACCATCATGAGATTGGAGCAATGTGCTCAGTCTTCTATGGGAAGAGCCATTAGATCTCAGGGTGCTCTTGCAATAGTGTATGGGCGCATTCTGAAGGAATATATTAGAAAAAGCAAGGTTATACTTGGCAGAGCAACAAATGATGTACATGTTGATATTGACTTGGGAAAAGAAGGGGAGGAGGCGGCTACAAAAATATCTAGAAGACAGGCTTTAATAAAGCTCGACGCAGATGGTTCTTTCATAATTAAAAATCTTGGCAAGAGATCTATCTTCTTGAATGGCAAAGAAATTGCTACAGGACAAGCGCGGGGTCTTGGTGCTAGTAGTGTGATCGAGATTAGAGGCATTTCACTCATCTTTGAGACCAATAATAGGTGCGTCAAGAGGTTTTTAGAAAATGTGAATGAAAAGATATGA 2118 0.4358 MDPVEVLPPWVPEDDLLLKNAVEAGASLESLARGAVRFSRRYSFRELQDRWLSLLYDVDVSTKAALAMRNLELAKSAATGGEGSGSGGGEKRKFQSSGGVGKKIKFQSVRKQYCTMQKKLRRHCSSVMSSKVKNGVVGCEGKENVVVDGNLNSDVVNSKAVGYGNCLGSEEVEAGQLSDLVSDVPLWKTIEDVCLPDVPVHVSVEGKSCGSEGGVDLKDECGNGGLKLNAPDAESLLNLANEDAVLFVNIEGKEVMAMDKNKDKPCYDNVDSLLLSSSGDVSELQKLDVEAKISVPCGCASDGMGIAANPLGGSCGDQHFVSDPRNNATLSAVAKSPHPEHSEGFMICVLNTEHPDIPCNANMDLSVVIPELPALKSQPVAKEVGFSESAISNQRRNEPDGSLKKEAVLSQSFAASQTGRQESVPNVNSSSKPVVFGLKSENPGRNSISAVSRQNNNVDVNPSHGRPVRSNVIYGHLKQEDIDAPATAHVKAEEHKALSKSEAKSLSGGNIEDDDEDYNDDDYDDDELPNFSDVETMILEMDLSPMDEDPNARREVLRYQHEESRKTIMRLEQCAQSSMGRAIRSQGALAIVYGRILKEYIRKSKVILGRATNDVHVDIDLGKEGEEAATKISRRQALIKLDADGSFIIKNLGKRSIFLNGKEIATGQARGLGASSVIEIRGISLIFETNNRCVKRFLENVNEKI 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00440 705 PANTHER MICROSPHERULE PROTEIN 1 8 703 IPR037912 GO:0002151|GO:0031011|GO:0071339
Phco8g00440 705 MobiDBLite consensus disorder prediction 487 520 - -
Phco8g00440 705 ProSiteProfiles Forkhead-associated (FHA) domain profile. 606 664 IPR000253 GO:0005515
Phco8g00440 705 CDD FHA_MCRS1 585 690 - -
Phco8g00440 705 SUPERFAMILY SMAD/FHA domain 598 688 IPR008984 GO:0005515
Phco8g00440 705 Pfam N-terminal region of micro-spherule protein 10 72 IPR025999 -
Phco8g00440 705 MobiDBLite consensus disorder prediction 413 467 - -
Phco8g00440 705 MobiDBLite consensus disorder prediction 413 464 - -
Phco8g00440 705 FunFam Microspherule protein 1 549 700 - -
Phco8g00440 705 MobiDBLite consensus disorder prediction 487 511 - -
Phco8g00440 705 Gene3D - 550 701 - -
Phco8g00440 705 SMART FHA_2 605 664 IPR000253 GO:0005515
Phco8g00440 705 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00440 Phco-Chr8 4039284 4043369 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00440 8 4039284 4043369 Phco8g00440 8 4039284 4043369 ECH