Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00438 ATGGTAGCCATAATGTTCCTTCTCATTTTCTCATCTCTTACCTCAATTTCGGAGCCATGTCACGTGGTGGACAAAGAAGCATTACTAGAATTCAAGAGCAGGATCATCTCTGACCCTTCAAATCTGCTAGATTCGTGGACACCTTCCTCTGACTGCTGCCACAATTGGGAAGGCATCGCATGTGGTTCCACTGGCAGGGTCATCAACCTTACTAGAATAGGCGTTGTGTTCGACGCTGATGACATCCCTCTAGAAACTTACATGTCAGGAACACTATCTCCTTATCTTGGAAACTTGTCTAGTTTGCAAGTTTTGGACCTTAGCAATCTGAAGCACTTGCATGGTCCAATACCCCCAGAACTCGCCGAGTTATCCCACTTGAGAAAACTATTTCTCTATTCAAATGAGTTCTCAGGTGGTGTACCAGCATCTTTTGAAAAGCTTTCACGGCTTCAGAGTTTGTACCTCGATAACAACCAATTGTTTGGTAATGTTCCTTTTTCTGTCTTTGCCTCCTTGAAGTCTCTTTCAGAACTTGGTCTATCTGGGAACAAGCTTTCTGGGGGGATTCCTTCTTCCATCGGAAGAATGGCATTTCTCACCAGGCTTGACCTTCATCAAAACAATTTTCATGGAAGCATTCCTTCTAGCATTGGAAATCTTGTAAACCTCAAGGACTTGGATTTCTCTTATAATCAGATTAGTGGAAGAATCCCAGAGTCAATTGGGAGACTTTCACAATTGGTTTTTCTTGATCTCATGCATAATAATTTCACAGGAAACCTCCCTTTTTCTATTGGGGATTTATGTTCTCTAAAGTTTTGCAGTTTAGCAGAGAACAAGCTAACAGGCGTTTTGCCTTATTCCATTGGAAAACTCCGCAATGTGCAAAGGGTAATCCTCGAGAACAATAAACTCACTGGGAAGTTACCTTCCACCATTGTGCATCTAGCTAGTTTAACTGATTTATTTCTCGCAAACAATGAATTCAGTGGCAAAATTCCACCTTCCTTTGGCCATTTAATCAACCTGCAAACACTGGATTTGTCAAGAAACCAACTTTCTGGTCCACTTCCCCCTCAACTTGCTAAACTACAGAGTTTGCAAACTTTAGACTTGTCATTCAACCCATTAGAACTAGCCAAAGTACCCAATTGGATTTCCAAGTTGAGAGTTTTTCAGTTGAAATTGGCCAAAACGGGGATCAAAGGCCAACTTCCAAAGTGGCTTGCATATTCATCAGTGTCAACCCTTGATTTGTCAAGCAATGCATTAACGGGAAAACTGCCATGGTGGATTGGAAACATGACTCGCCTGTCCTTCCTGAACCTGTCAAACAACGAGTTTCATTCGTCAATCCCAGTGGCCTTCAAGGGCCTTTCTTCTCTGATGGACCTTGACCTCCATTCCAATAAGCTCACAGGGTCTCTAAGAGTGGTGTTTGAGAAAGAGCTTCAATTTTCACTAGGCCATTTCAACTCCCTCGACCTATCAAACAACAAGTTTTGTGGTCCCATTGACGAGAACATTGGACAAAAGGCCTCAATGAGTTCAATCATATCTCTTGCATTGTCACACAACCCTTTGGGAGGATCTATACCAAAGTCAATAGGGAAACTGAGAGAATTGGAGATTCTGGACCTTGAAGACAGTGAACTCTCGGGGAATATACCTAAAGAGCTTGGCGATGCTGAAACGTTAACAAAGATTAATCTTTCAAAGAACAAATTAAGTGGCAATATACCAGAGAAGGTCCTAAATTTGAAGAAGCTTGAAGAGTTGGATGTGTCAAGGAACCGACTCAGAGGGAGGATCCCTCCACATAAGACCATGTTTCCTATTTCAGCTTTTGTGGGTAATCGTGGATTGTGTGGACCACCACTTCCTCCTTGTAAACTTAGTTATAGATAG 1911 0.4218 MVAIMFLLIFSSLTSISEPCHVVDKEALLEFKSRIISDPSNLLDSWTPSSDCCHNWEGIACGSTGRVINLTRIGVVFDADDIPLETYMSGTLSPYLGNLSSLQVLDLSNLKHLHGPIPPELAELSHLRKLFLYSNEFSGGVPASFEKLSRLQSLYLDNNQLFGNVPFSVFASLKSLSELGLSGNKLSGGIPSSIGRMAFLTRLDLHQNNFHGSIPSSIGNLVNLKDLDFSYNQISGRIPESIGRLSQLVFLDLMHNNFTGNLPFSIGDLCSLKFCSLAENKLTGVLPYSIGKLRNVQRVILENNKLTGKLPSTIVHLASLTDLFLANNEFSGKIPPSFGHLINLQTLDLSRNQLSGPLPPQLAKLQSLQTLDLSFNPLELAKVPNWISKLRVFQLKLAKTGIKGQLPKWLAYSSVSTLDLSSNALTGKLPWWIGNMTRLSFLNLSNNEFHSSIPVAFKGLSSLMDLDLHSNKLTGSLRVVFEKELQFSLGHFNSLDLSNNKFCGPIDENIGQKASMSSIISLALSHNPLGGSIPKSIGKLRELEILDLEDSELSGNIPKELGDAETLTKINLSKNKLSGNIPEKVLNLKKLEELDVSRNRLRGRIPPHKTMFPISAFVGNRGLCGPPLPPCKLSYR 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00438 636 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 359 634 - -
Phco8g00438 636 SUPERFAMILY L domain-like 277 607 - -
Phco8g00438 636 Gene3D Ribonuclease Inhibitor 387 512 IPR032675 -
Phco8g00438 636 Gene3D Ribonuclease Inhibitor 192 286 IPR032675 -
Phco8g00438 636 Gene3D Ribonuclease Inhibitor 287 386 IPR032675 -
Phco8g00438 636 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 84 263 - -
Phco8g00438 636 FunFam Leucine-rich receptor-like protein kinase family protein 265 358 - -
Phco8g00438 636 Gene3D Ribonuclease Inhibitor 515 631 IPR032675 -
Phco8g00438 636 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 12 332 - -
Phco8g00438 636 PRINTS Leucine-rich repeat signature 344 357 - -
Phco8g00438 636 PRINTS Leucine-rich repeat signature 365 378 - -
Phco8g00438 636 Pfam Leucine rich repeat 337 378 IPR001611 GO:0005515
Phco8g00438 636 Pfam Leucine rich repeat 200 258 IPR001611 GO:0005515
Phco8g00438 636 Gene3D Ribonuclease Inhibitor 22 191 IPR032675 -
Phco8g00438 636 Pfam Leucine rich repeat N-terminal domain 24 61 IPR013210 -
Phco8g00438 636 SUPERFAMILY L domain-like 34 382 - -
Phco8g00438 636 SMART LRR_sd22_2 341 370 - -
Phco8g00438 636 SMART LRR_sd22_2 221 247 - -
Phco8g00438 636 SMART LRR_sd22_2 148 178 - -
Phco8g00438 636 SMART LRR_sd22_2 588 616 - -
Phco8g00438 636 SMART LRR_typ_2 365 390 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 460 483 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 173 197 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 341 364 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 124 147 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 540 564 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 317 340 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 588 619 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 221 245 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 148 172 IPR003591 -
Phco8g00438 636 SMART LRR_typ_2 436 459 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00438 Phco-Chr8 4022051 4023961 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00438 8 4022051 4023961 Phco8g00438 8 4022051 4023961 ECH