Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00390 ATGTCTAATGATCCTGAAGTCAATGTCCCTCTAATTAAAAGGCATCATCACAACAACGACGCCATCTCCGTTGCGGAGAACTCGCCGGCCGCCGAGAATTCTCCGATCGAGCAGGTAGCGCTGACGGTTCCTGTGGGCGACGATCCGTCGCTGCCTTCCTTCACTTTCCGGACATGGATTTTGGGAACCCTGGCGTGCGTGCTTCTCTCCTTCCTGAACCAGTTCTTCGGATTCCAGAGGGAGCCACTGTCAGTGACGGCGATATCGGCGCAGATAGCGGTGGTGCCGGCGGGACACCTGATGGCGGCGGCGGTGACAAGGCGCGTGTTCATGAAGGGGACGAAGTGGGAGTTCACGCTGAACCCAGGGAAGTTCAATGTGAAGGAGCACGTGCTTATCACTATCTTCGCCAGTTCGGGAGCCGCTAGCGTCTACGCCATCCGTTTCGTTAGCGCCGTTAAAGTGTTCTACCGGAAGGACTTAACGGTTTTAGCCGCGTTATTGGTGGTTATAACGTCTCAGGTTTTGGGCTTCGGTTGGGCCGGAATATTCCGTCAATACCTGGTGGAGCCCGCTTCCATGTGGTGGCCCCAAAACCTTGTGCAGGTCTCCCTGTTCAGGGCGCTACATGAGAAAGAGGAGAGACGAAAGGGAGCGTTAACTCGGAATCAGTTTTTCCTTATAGCATTTCTTTGCAGTTTTGCTTATTATGTTTTTCCTGGCTACTTGTTCCCTTCGTTAACATCGATTTCGTGGATTTGCTGGATGTTTCCCACTTCCGTGATAGCACACCAGTTAGGTTCAGGGTTGCATGGTCTTGGAGTTGGTGCTGTTGGTTTTGACTGGTCAAGTATATGTTCTTATCTTGGTAGCCCTTTGGCCAGTCCATGGTTTGCTACGGCTAATGTTGCTGCCGGTTTTGCCATTTTCATATATGCCATTGTGCCCATTGCTTATTCCACAAACCTTTACAACGCAAGAAGATTTCCCATATTTTCAGATGAACTATTCATGTCCAATGGTCAAAAGTACAACATATCAGCTATAATAGACTCCAACTTTCACCTTGACATGGAGGCTTATGAGCGTGAGGGCCCTCTTTATCTTAGCACCATGTTTGCTATGTCATATGGCATTGGTTTTGCTTGCCTTTCTGCAACCCTCGTTCATGTGTCACTCTTCCATGGGAGTGAAATATTCCGACTGAGTAAGTCTGCTTTCCAAGAGAATAAGATAGATATACACACGAAGATCATGAGAAAGAACTACAAACAAGTTCCAGAATGGTGGTTTCTTTGCATTCTTCTGTTCAACATCGTTGCAACTATATTTATATGTGAATATTTCAACAATGAACTTCAACTACCATGGTGGGGTGTAGTGTTAGCTTGTGTTGTTGCCATGTCATTTACTCTTCCCATTGGAGTAATTAGAGCCACCACAAATCAGGCACCAGCTTTGAATATAATTACAGAATACATAATTGGATACATCTACCCAGGATATCCGGTTGCCAACATGTTGTTTAAAGTGTATGGTAATGTGAGCATGAAGCAGGCAATTTTCTTTTTACAAGATTTTAAGCTTGGCCACTACATGAAGATCCCTCCTAGAGAAATGTTCTTGGCACAGGTAGTTGGCACCTTAATGTCTGGTGTGGTGCATTTACTAACAGCATGGTGGCTCATGAACACTGTTCCAAATATATGCGAACGAGAATTGCTTCCAGCAGGAAGTCCTTGGACTTGTCCTGGTGATCATGTGTTCTATGACGCGTCTGTGATATGGGGTTTGATAGGGCCTCGTAGAGTTTTTGGAGATCTTGGACACTACTCGGCTGTTAACTGGTTTTTCTTGGCTGGAGCAATAGCTCCTTTCTTAGTTTGGCTAGCACACAAGGCCTTGCCTCAAAAACAGTGGATCAGGCTTATCACTGTGCCTGTGCTCTTGGGTGCATTATCTGATATGCCTCCAGCTACAGCAGTAAACTACACCAGTTGGGTCCTTGTTGGATTTGTCTCAGGATTTGTTGTTTACCGTTACTATCGTGGTTGGTGGAGCCGACACAACTATGTCTTATCTGGGGCACTCGATGCTGGTTTGGCCTTCATGGGGGTTTTGCTCTACTTGTGCTTGGGGATGGAACATATCAGCCTAAACTGGTGGGGCAGTGATTCAGATGGGTGCCCATTAGCTTCATGTCCAACTGCTCCAGGTGTTGAATCTGAAGGGTGTCCTCTTTACTAA 2247 0.4682 MSNDPEVNVPLIKRHHHNNDAISVAENSPAAENSPIEQVALTVPVGDDPSLPSFTFRTWILGTLACVLLSFLNQFFGFQREPLSVTAISAQIAVVPAGHLMAAAVTRRVFMKGTKWEFTLNPGKFNVKEHVLITIFASSGAASVYAIRFVSAVKVFYRKDLTVLAALLVVITSQVLGFGWAGIFRQYLVEPASMWWPQNLVQVSLFRALHEKEERRKGALTRNQFFLIAFLCSFAYYVFPGYLFPSLTSISWICWMFPTSVIAHQLGSGLHGLGVGAVGFDWSSICSYLGSPLASPWFATANVAAGFAIFIYAIVPIAYSTNLYNARRFPIFSDELFMSNGQKYNISAIIDSNFHLDMEAYEREGPLYLSTMFAMSYGIGFACLSATLVHVSLFHGSEIFRLSKSAFQENKIDIHTKIMRKNYKQVPEWWFLCILLFNIVATIFICEYFNNELQLPWWGVVLACVVAMSFTLPIGVIRATTNQAPALNIITEYIIGYIYPGYPVANMLFKVYGNVSMKQAIFFLQDFKLGHYMKIPPREMFLAQVVGTLMSGVVHLLTAWWLMNTVPNICERELLPAGSPWTCPGDHVFYDASVIWGLIGPRRVFGDLGHYSAVNWFFLAGAIAPFLVWLAHKALPQKQWIRLITVPVLLGALSDMPPATAVNYTSWVLVGFVSGFVVYRYYRGWWSRHNYVLSGALDAGLAFMGVLLYLCLGMEHISLNWWGSDSDGCPLASCPTAPGVESEGCPLY 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00390 748 PANTHER ISP4 LIKE PROTEIN 27 746 IPR004648 GO:0055085
Phco8g00390 748 NCBIfam OPT family oligopeptide transporter 39 713 IPR004813 GO:0035673
Phco8g00390 748 NCBIfam small oligopeptide transporter, OPT family 32 716 IPR004648 GO:0055085
Phco8g00390 748 Pfam OPT oligopeptide transporter protein 54 711 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00390 Phco-Chr8 3545960 3551810 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00390 8 3545960 3551810 Phco8g00390 8 3545960 3551810 ECH