Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00385 ATGGCATCTGAAAACCCCAACCAGAAAAACTGTCTCTATCCGCAGGTAATAATCGATGCAAACCACGAAACATGCTCTTCCAACCCTTCCTCCAATCTCTACCCCAAAATCGACGAGGTCGGAAACCTCCTCCCGGACAACATTAGCCCCTCCGCCCCACCGCTCGCCGCCGAGGAGGTTCTCATCAAGGTCCCCGGCGCCATCCTCCACCTCATTGACAAGGAATGCAGCGTGGAGCTCGCCTGCGGCGACCTCACCATCATCTGCCTCCGCCAGGGGACGAATATCGTCGCCTTTTATGCAAATGTCGGAGACATACAGTGGCCTCTGGCGAAGGACGAGGCGGCGGTCAAGGTCGATGACTCGCATTACTTCTTCTCCCTCCACATGCCGGACGAATCCAAATCAGATTCCTCCAGTGATGAGGAGGAAAAGAGAGGAATATTCAACCTCCGCCGGAACCGGAAGAAGAAAAACAAGGACTCCGTTCCCAGCGTGCTGAGCTACGGCTTAACGATAGCGTCGAAGGGGCAGGAGAATTTGCTGAAGGAGTTGGAAAAGGTGTTTCAGGAATGCAGTGCTTTCTCGGTGCAGAAGGTGTCGGAGAATGCGAAGAAGGAGGGGGAGGCATTGGATGCGTCGGTGGCGAAGGAGGTATCGCCGGCGGATTTGCAGACGGAGGAGAAGAAGGAGATGTTGGAGGAGAAGTGTGCGATGTACTGGACCACGTTGGCTCCTAATGTAGAGGATTACAGTGGAGCTGCTGCAAAGCTTATTGCGGCTGGTTCTGGACAACTGGTGAAGGGGATTTTGTGGTGTGGGGATGTGACGGTGGAACGGTTGCGGTGGGGGAATGAGATCATGAAGAGAAGGATGGCTCCGGGTTCGCAGGAAGAGATTAGTCCCGAAACCTTCAAGCGGATCCAAAGGGTTAAGAGAATGACCCAAATGACAGAGAGTGTAGCAAATGGGGTCCTCACTGGGGTTGTGAAGGTCTCTGGATATTTTACTAGCTCACTGGCAAATTCAAAAGCGGGAAAGAAATTTTTCAGCTTTCTACCTGGCGAAGTTGTGCTTGCATCATTGGATGGATTCAGCAAAGTGTGCGATGCTGTTGAAGTAGCAGGAAAAAGTGTCATGTCAACGTCAAACACTGTTACAACCGAGCTTGTCACTCATAGATATGGAGAAGAAGCTGCAAAGGCAACAAGTGAAGGATTGGATGCTGCTGGTCACGCTGTGGGGACTGCATGGGCTGCATTTAAGCTTCGACAGGCTTTGAATCCTAAGAGTGTTATAAAACCTACAGCACTGACCAAATCTGCAGCTAAATCTGCTGCTGCTGAACTTAAGGCTAAAATATCCAAGTGA 1371 0.5135 MASENPNQKNCLYPQVIIDANHETCSSNPSSNLYPKIDEVGNLLPDNISPSAPPLAAEEVLIKVPGAILHLIDKECSVELACGDLTIICLRQGTNIVAFYANVGDIQWPLAKDEAAVKVDDSHYFFSLHMPDESKSDSSSDEEEKRGIFNLRRNRKKKNKDSVPSVLSYGLTIASKGQENLLKELEKVFQECSAFSVQKVSENAKKEGEALDASVAKEVSPADLQTEEKKEMLEEKCAMYWTTLAPNVEDYSGAAAKLIAAGSGQLVKGILWCGDVTVERLRWGNEIMKRRMAPGSQEEISPETFKRIQRVKRMTQMTESVANGVLTGVVKVSGYFTSSLANSKAGKKFFSFLPGEVVLASLDGFSKVCDAVEVAGKSVMSTSNTVTTELVTHRYGEEAAKATSEGLDAAGHAVGTAWAAFKLRQALNPKSVIKPTALTKSAAKSAAAELKAKISK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00385 456 PANTHER SPARTIN 29 451 IPR045036 -
Phco8g00385 456 MobiDBLite consensus disorder prediction 130 150 - -
Phco8g00385 456 Pfam Senescence domain 258 444 IPR009686 -
Phco8g00385 456 MobiDBLite consensus disorder prediction 130 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00385 Phco-Chr8 3507615 3510125 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00385 8 3507615 3510125 Phco8g00385 8 3507615 3510125 ECH
Phco4g00847 4 6546196 6551202 Phco8g00385 8 3507615 3510125 PCT