Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00380 ATGGCAAAGAGAAACTGCGTCGTTATTCTGTCATCGGAAGATGAAGATGCTGCTTCTAACGTTCCTTCGTTGAGTTCAAGTCGCAGCTATACGAAGACGAATTCGAAGTCGAAGTCGAGGTCCACCTCAACATCTTCTCGGGGAAGGAAGAAGGCACGTGCTTCGCATTCTCGCTCTCACCTCTCCAAACTGCACGAGATAGATTTATTTGGAGATGACTTCAATGAAGTGTTTACTGGGTCAAAGGTATCCGCTGGTACTCAAAGGAGCTTTGCAGAGGAGTTATGGGTTGATAAATACAAGCCCAATTCACTGGAAGAGCTTGCTGTTCACAAGAAGAAGGTTGAAGATGTCAAGACGTGGTTTGAAGAGAGGTTGAAACCTTTGAAGGGTGTCTACAATAATAATGTTCTCCTCATCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTTCTATTCATGTAATTGCATCTCATCTAGGAGCAATAGTTTATGGGTGGAACACACCTACACCTGTAATTTGGCAGGAGCATCTCTATAACTCTGGCACAGGGACTCAATACACATCCAAGTTAGATGAATTTGAAAGTTTCGTTGAGAGAGTACGAAAATATGGATTATTGCTAACTTCCTGTACTGGGGAGTCAAAGCCTCCCATCATACTTTTAATAGACGATCTTCCCATGACTAATGGGAAATCTGCTTTTGGAAGACTTAAAAATTGCTTGCAATTTTTGGTGAAATCAACTCAGATACCCACAGCAATATTGTTAACTGACTATGGAAATGCTGACTCAGTAGATTATAATGCTCGTTGCCTGGAAGAACTGAAGCTATCTCTAGAGAGTTCTGGGGCTTGTAAGGTTGCTTTCAATCCAATTACAGCGAATTCTATGAAGAAGATTCTTTTTAGAATATGCCAAGTGGAGCAGTGCGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAAACAAGTGGAGGTGACATCAGACATGCAATCACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTAGTGAATTCTTTGGCCTCATCTACTTGCTCTCATGGTTCATTGAATGAGGAAAGTAATAAACCTGTTAGATCAGATTATGGATATTCATTGCACTTTGGCAGAGATGAAGCATTATCTCTATTTCATGCTTTGGGGAAATTTTTGCATAATAAAAGGGAGACTGGAGTTGGAACAGAATATGTTCTGGATTTTTTGGATGATGAGGCAATAGATGACGCATGGACTCTCTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCTAAACTACGGGGTAGTTATAACGAGGCAGAGGGTGTTTTACAGTCAGCTGCTGCATCCATAGCTGTCCGTGGGGTGCTATTTGGAAATTCTAATCCACTATCCTCCAGGTGGCATGCAGTTCGGCGACCAAAGCTCTGGCAAGTTGAGAAAGCATCATTATACAAGAATGAGGTGGATAGGCTCAGAATTCCTGCCTGTAAACGGTTTAGTTCTTATCATATGTCAATTATGGCCACTGAGTACATGCCCATGCTTAAATTGCTCGGAAATAGAGCATGTGGTGGATATGATGGACCGAGTCAGAAATCATCACGGAACTTGGAAATGGAAGACTTTGATTTCGACAAAATGGATTTAGATGAACAATCTAGGGGCATTTCCGATGATGACATAGAAGATTGGTAG 1704 0.4155 MAKRNCVVILSSEDEDAASNVPSLSSSRSYTKTNSKSKSRSTSTSSRGRKKARASHSRSHLSKLHEIDLFGDDFNEVFTGSKVSAGTQRSFAEELWVDKYKPNSLEELAVHKKKVEDVKTWFEERLKPLKGVYNNNVLLISGQAGVGKSASIHVIASHLGAIVYGWNTPTPVIWQEHLYNSGTGTQYTSKLDEFESFVERVRKYGLLLTSCTGESKPPIILLIDDLPMTNGKSAFGRLKNCLQFLVKSTQIPTAILLTDYGNADSVDYNARCLEELKLSLESSGACKVAFNPITANSMKKILFRICQVEQCDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPNLVNSLASSTCSHGSLNEESNKPVRSDYGYSLHFGRDEALSLFHALGKFLHNKRETGVGTEYVLDFLDDEAIDDAWTLSSYLGDADILLAKLRGSYNEAEGVLQSAAASIAVRGVLFGNSNPLSSRWHAVRRPKLWQVEKASLYKNEVDRLRIPACKRFSSYHMSIMATEYMPMLKLLGNRACGGYDGPSQKSSRNLEMEDFDFDKMDLDEQSRGISDDDIEDW 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00380 567 CDD HLD_clamp_RFC 293 338 - -
Phco8g00380 567 Gene3D - 93 274 IPR027417 -
Phco8g00380 567 MobiDBLite consensus disorder prediction 43 58 - -
Phco8g00380 567 MobiDBLite consensus disorder prediction 548 567 - -
Phco8g00380 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 343 IPR027417 -
Phco8g00380 567 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 405 564 IPR004582 GO:0006281
Phco8g00380 567 FunFam RAD17 checkpoint clamp loader component 93 274 - -
Phco8g00380 567 Gene3D - 295 357 - -
Phco8g00380 567 MobiDBLite consensus disorder prediction 14 60 - -
Phco8g00380 567 Pfam Rad17 P-loop domain 93 262 - -
Phco8g00380 567 MobiDBLite consensus disorder prediction 16 42 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00380 8 3468405 3472856 Phco8g00380 8 3468405 3472856 ECH