Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00341 ATGTCTGAACCAACCAGGTCACCATTTTATACGCCGTTATTCGCTATCGTTCTCCCTGTCACTGTGGCTGCGATTCTCTTCCGGCTCGAACCGTTTCAACCGGTTGCGTTGCCGGTTCGGCTGGGCCACCCCGTCGTGGTGGTTCCCGCACGTAACGACCACGCTCGAGTTGGATCTGAAGCTGTGGCCGAGGGACACGTGGAAGGCCCCGAAGACTTGGCCTACGACGCCGCGTCAGGTGTTGTCTACACTGGATGTGAGGATGGGTGGATCAAGCGAGTCACGGTGAACGACTCGGCCGTTGACTCGGTGGTTGAAAATTGGGTCAACACTGGAGGAAGGCCACTTGGGCTAACTTTGCTACAGAACGGTGAACTCATAGTTGCCGACACGGGAAAGGGATTGTTGAGGGTGTCAAGTGAAAAGGAGGTTGAGTTGCTGGTAGACGAGTTTGAGGGCCTAAAATTCAAATTAACAGATGGTGTTGATGTAGCAGAAGATGGTACTATTTATTTCACGGATGCAACTCACAAATACTCTTTAAATGATGCTGTCATCGACATCTTGGAAGGGAAGCCTAATGGCAGATTCTTCAGCTATAATCCAGCAACAAAGAAGACATCCCTGCTTGCCCAAGACCTCTACTTTGCCAATGGGGTTGCAGTTTCACCTGATCAACAATTTGTGGTCTTTTGTGAATCTGTCCTGATGAGATGCAATAAATATTACGTACAGGGCCCTAAAAAAGGGACCATAGAGAAGTTCTGTAACGTACCTGGCATGCCTGATAACATTCATTATGATGGACAAGGGCAGTATTTGATTGCATTGTTCACGGCCTTTACTTCTGAACTGGATTTGGCATTTAGATATCCTTTCATAAGGAAGGTTGCAGCAATTGTAACAAAATATGTGTGGAATATACCTCTCTCCAAGAATGGAGGATTTGTAGTCGTGGATTTAGAAGGAAAACCAACTGCACATTATTATGATCCCAAACTAGCATTGACCAGTGCGATTAAAATTGGGAATCATATATATGCTGGTTCCATTTTCTACCCATTTGTAACACGTTTTGATATTGGGAAATATCCTGCTCTTCCCACAGTCTGA 1113 0.4618 MSEPTRSPFYTPLFAIVLPVTVAAILFRLEPFQPVALPVRLGHPVVVVPARNDHARVGSEAVAEGHVEGPEDLAYDAASGVVYTGCEDGWIKRVTVNDSAVDSVVENWVNTGGRPLGLTLLQNGELIVADTGKGLLRVSSEKEVELLVDEFEGLKFKLTDGVDVAEDGTIYFTDATHKYSLNDAVIDILEGKPNGRFFSYNPATKKTSLLAQDLYFANGVAVSPDQQFVVFCESVLMRCNKYYVQGPKKGTIEKFCNVPGMPDNIHYDGQGQYLIALFTAFTSELDLAFRYPFIRKVAAIVTKYVWNIPLSKNGGFVVVDLEGKPTAHYYDPKLALTSAIKIGNHIYAGSIFYPFVTRFDIGKYPALPTV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00341 370 FunFam Protein STRICTOSIDINE SYNTHASE-LIKE 6 56 363 - -
Phco8g00341 370 Gene3D - 54 359 IPR011042 -
Phco8g00341 370 SUPERFAMILY Calcium-dependent phosphotriesterase 58 362 - -
Phco8g00341 370 Pfam Strictosidine synthase-like, N-terminal 59 94 - -
Phco8g00341 370 PANTHER STRICTOSIDINE SYNTHASE-RELATED 19 351 - -
Phco8g00341 370 Pfam Strictosidine synthase 160 246 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00341 Phco-Chr8 3154576 3157395 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00341 8 3154576 3157395 Phco8g00341 8 3154576 3157395 ECH