Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00340 ATGTTCTGGACTCGTTCTCTCAGACTTTTCAGATCCTCTCGCGTCTTCTCGTCTCATCATTCGCGCAAATTTTGTAGCTTTTCGCAGGACAATGATCCGGGTTCATGGGAATCGATGGAGGGTCTTTCTCGTTGCTCTGCCAATTTTGTTCCTTTGTCTCCCATCACCTTCCTAGAGCGAGCAGCCAAGGTCTGCAGAGACAGGACCTCGGTCGTCTATGGATCTCTGGAGTATAACTGGGGCCAAACCCATCAACGCTGCTTGAAACTCGCTTCTGCTTTGACCCACTTGGGAATTTCTCGCGGGGATGTGGTTGCCACCCTATTACCCAATGTCCCTGCTATGTACGAGTTACATTTTGCTGTCCCAATGGCTGGAGCCATTCTATGCTCCCTTAACTCACGCTTAGATGCAGCTATGGTTTCAGTCCTTCTGGAGCATTCACAAGCAAAGGTCCTTTATGTAGACTACCAACTCCTTGAAGTTGCTAGGGGAGCTTTGGACTTGCTAGGCAAAAAAGCTAGAGAATTGCCAATTTTGGTTTTAGTCACAGACTCGGATTGTCCATCTACATTTGACATTACATCAGTTAGTTATGAGTATGAGAGGCTTCTAGCTGATGGGCACAATGGTTTTGACATAGTGAGACCCCATAGTGAATTGGATCCTGTAAGTATAAACTACACCTCAGGCACTACATCTAGGCCTAAGGGAGTTGTCTACAGTCACAGGGGTGCTTATCTTAATTCTCTAGCAACTGTTCTACTCTTTAGAATGGACCTTTTTCCTGTTTATCTTTGGAATGTTCCAATGTTCCACTGCAATGGGTGGTGCCTCCCATGGGGAGTGGCATCACAATTTGGGATCAATATTTGTGTCAGGAAGGTCTCTCCAAAAAACATTTTTGACAATATAGCTCGGCATAAGGTGACACACATGGCAGGAGCACCAACAGTGCTGAACATGATTGTGAACTCTGCATTGACCGACCGAAAGCCACTCAATCAGAAGGTGGTGGTGATGACAGGAGGTTCACCTCCACCGCCACAGATCCTTGACAAGATGGAGAAGATTGGCTTTAGCATTTCTCACCTGTATGGCCTCACAGAAACGTATGGTCCAGGCACTTTCTGTGCTTGGAGACCTGAGTGGAACTTTTTGCCCCATGAAGATAGATCAAAGATGAAAGCCAGGCAGGGGGTGCCCCATGTGGCTTTGGAGGAAATTGATGTGAAAGATCCTGCCTCAATGGAAAGTGTTCCATCTGATGGAAAAACAATGGGAGAGGTAATGTTTAGAGGGAACACAGTGATGAGTGGATATTTTAGAGATCTGAAAGCAACTGAAGAAGCCTTCAAAGATGGGTGGTTTCGTAGTGGGGATCTGGCTGTGAAACACTCTGATGGTTACATAGAAGTCAAGGACAGGTTGAAGGACATAATAATCTCTGGGGGAGAGAATATCAGCTCAGTGGAGGTAGAGACAGTTTTGTATAGCCATCCAGCAATTCTTGAAGCTGCAGTTGTTGCCAGGCCTGATGATCATTGGGGCCAAACTCCTTGTGCTTTTGTGAAGTTGAAACAGGGGTTTGATGTAAATGCTCAAGACATAATCAACTTTAGCAGGGATCATTTGCCCCATTACATGGCTCCTAAAACAGTCGTTTTTCAAGACATTCCAAAAACTTCAACCGGGAAGATACAGAAGTATGTTCTGAGGGAGAAAGCCGAAGCTTTGGGCAGCCTTTCTTGA 1752 0.4583 MFWTRSLRLFRSSRVFSSHHSRKFCSFSQDNDPGSWESMEGLSRCSANFVPLSPITFLERAAKVCRDRTSVVYGSLEYNWGQTHQRCLKLASALTHLGISRGDVVATLLPNVPAMYELHFAVPMAGAILCSLNSRLDAAMVSVLLEHSQAKVLYVDYQLLEVARGALDLLGKKARELPILVLVTDSDCPSTFDITSVSYEYERLLADGHNGFDIVRPHSELDPVSINYTSGTTSRPKGVVYSHRGAYLNSLATVLLFRMDLFPVYLWNVPMFHCNGWCLPWGVASQFGINICVRKVSPKNIFDNIARHKVTHMAGAPTVLNMIVNSALTDRKPLNQKVVVMTGGSPPPPQILDKMEKIGFSISHLYGLTETYGPGTFCAWRPEWNFLPHEDRSKMKARQGVPHVALEEIDVKDPASMESVPSDGKTMGEVMFRGNTVMSGYFRDLKATEEAFKDGWFRSGDLAVKHSDGYIEVKDRLKDIIISGGENISSVEVETVLYSHPAILEAAVVARPDDHWGQTPCAFVKLKQGFDVNAQDIINFSRDHLPHYMAPKTVVFQDIPKTSTGKIQKYVLREKAEALGSLS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00340 583 CDD ttLC_FACS_AEE21_like 49 574 - -
Phco8g00340 583 Gene3D - 478 579 IPR045851 -
Phco8g00340 583 Pfam AMP-binding enzyme 59 483 IPR000873 -
Phco8g00340 583 Pfam AMP-binding enzyme C-terminal domain 492 566 IPR025110 -
Phco8g00340 583 SUPERFAMILY Acetyl-CoA synthetase-like 39 577 - -
Phco8g00340 583 FunFam 2,3-dihydroxybenzoate-AMP ligase 478 580 - -
Phco8g00340 583 Gene3D - 43 477 IPR042099 -
Phco8g00340 583 PANTHER ACYL-ACTIVATING ENZYME 39 581 - -
Phco8g00340 583 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00340 Phco-Chr8 3151249 3154356 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00340 8 3151249 3154356 Phco8g00340 8 3151249 3154356 ECH