Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00309 ATGCACGCTGTCCGCGTGGGCAACGGTGGAGCGCGGGAAGCTGAGAGTTTCTATAAAAAGGGTTCTAAAGTAACGCTCTTCCTTTCAAATCCAATTCCATTTCTAGCACTCGCCATCTTCGATTTATCCACCTCTTCAACTTCCTCCGCCATTCAGCTTCTGGGTTCTGCATTTTCCCTCCTTTCCTGCATCTGCATCTGCATCTGCATTTCGTCGATCAGATCGACGAGGAAAATGGACGTTCGCCGTCGATCCATCCCCGCCTCCGGTGACCGCGTCAAAACCCAGAAGCTGATCAACAACGATAACCTCTCCACCACCGTCCTCCCTCTCTACCTCACCAACGCCCTCTTCTTCGGTGTCTTCTTCTCCGTCGCTTACTTCCTCCTCCACCGCTGGCGCGACAAGATCCGCACCGCCACTCCCCTCCACGTTGTCACCCCCGCCGAAACAGCCGCCATCGTCTCCCTCGTCGCCTCCGCCATCTATCTCCTCGGCTTCTTCGGCGTGGCCTCCCGCGACGAGCTCTCCGACGAGGAAACTGTCCTCCGCGAAGACTCTCGCGCTCCTGGACCCTGTCCCGCCGCGCTCCTCGACTCCCCAGTCTCCAAGAAAAAACTTAATCAAAACTCTCTCCCACGCTCCAAATCGGTGGAATTATCAAATCCTCCACCGCTAGAAGCCGCTGACGTGGCAGCACCAGCACCAGCACCGATCTCATTGTCTCCCGAGGACGAGGAGGTCGTGGAGGCGGTCGTGTCGGGATCGGTCCCGTCGTACGCGTTGGAGTCGCGCCTAGGCGAGTGCGGTCGAGCAGCTGCGATCCGGCGCGAGGCGGTGCAGAGACTGACGGGTCGGTCGCTGGAGGGTTTACCCGTGCAGGGGTTCGACTACGAGTCGATATTGGGGCAGTGCTGCGAGATGCCGATAGGGTTCGTGCAGATTCCAGTTGGGGTAGCGGGGCCGTTGTTGTTAGATGGGAAGGAATACACTGTGCCTATGGGCACCACTGAAGGGTGTCTGGTTGCCAGCACGAACAGAGGGTGCAAAGCTATTTACGTCTCTGGTGGTGCTTCCTCTGTGCTTCTCAGGGATGGCATGACCAGAGCACCCGTTGTGAGGCTGCCCTCTGCTCAGCGCGCTGCGCAGTTGAAGTTCTTCTTGGAGGATCCTCTCAATTACGATTCCCTTGCTGTCGTTTTCAACAAGTCAAGCAGATTTGCCAGGTTGCAGACTATTCAGTGTGCTATTGCGGGCAAGAATCTGTACATGAGATTCAGATGCAGCACTGGTGATGCCATGGGGATGAACATGGTGTCTAAAGGTGTTCAAAATGTCCTTGATTTTCTTCAGACAGACTTCCCTGACATGGAAGTTATTGGAATCTCTGGAAATTTCTGTTCGGACAAGAAAGCAGCAGCAGTGAACTGGATTGAAGGACGTGGCAAGTCGGTGGTGTGTGAGGCCGTAATTAAGGAGGAGGTGGTGAATAAGGTGTTGAAGACCACTGTAGAGGCCCTAGTCGAGCTTAACATGCTAAAAAACCTTACTGGCTCAGCCGTGGCTGGTGCTCTTGGTGGGTTCAATGCCCATGCTAGCAATATTGTGTCTGCTATCTACATTGCCACTGGTCAGGATCCTGCCCAGAATGTGGAGAGTTCTCACTGCATCACCATGATGGAAGCTGTCAATGATGGGAAGGACCTTCACGTTTCTGTGACCATGCCCTCAATTGAGGTTGGTACTGTTGGAGGGGGCACGCAACTTGCATCTCAGTCTGCATGTCTTAATTTACTTGGTGTGAAGGGTGCGAGTAAGGAATCCCCTGGTGCAAATTCTAGGCTGCTGGCCACCATTGTAGCCGGTTCAGTCCTGGCTGGGGAGCTATCACTCATGTCTGCAATTGCGGCTGGACAACTTGTTAAGAGCCATATGAAATACAACAGATCTAGCAGGGATATTTCTAAGATTGTTGCGTGA 1980 0.5399 MHAVRVGNGGAREAESFYKKGSKVTLFLSNPIPFLALAIFDLSTSSTSSAIQLLGSAFSLLSCICICICISSIRSTRKMDVRRRSIPASGDRVKTQKLINNDNLSTTVLPLYLTNALFFGVFFSVAYFLLHRWRDKIRTATPLHVVTPAETAAIVSLVASAIYLLGFFGVASRDELSDEETVLREDSRAPGPCPAALLDSPVSKKKLNQNSLPRSKSVELSNPPPLEAADVAAPAPAPISLSPEDEEVVEAVVSGSVPSYALESRLGECGRAAAIRREAVQRLTGRSLEGLPVQGFDYESILGQCCEMPIGFVQIPVGVAGPLLLDGKEYTVPMGTTEGCLVASTNRGCKAIYVSGGASSVLLRDGMTRAPVVRLPSAQRAAQLKFFLEDPLNYDSLAVVFNKSSRFARLQTIQCAIAGKNLYMRFRCSTGDAMGMNMVSKGVQNVLDFLQTDFPDMEVIGISGNFCSDKKAAAVNWIEGRGKSVVCEAVIKEEVVNKVLKTTVEALVELNMLKNLTGSAVAGALGGFNAHASNIVSAIYIATGQDPAQNVESSHCITMMEAVNDGKDLHVSVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGANSRLLATIVAGSVLAGELSLMSAIAAGQLVKSHMKYNRSSRDISKIVA 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00309 659 PANTHER 3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 94 652 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 1. 425 439 IPR023076 GO:0004420
Phco8g00309 659 SUPERFAMILY NAD-binding domain of HMG-CoA reductase 366 482 IPR009023 -
Phco8g00309 659 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 3. 634 647 IPR023076 GO:0004420
Phco8g00309 659 Gene3D - 316 636 IPR023074 GO:0004420
Phco8g00309 659 Gene3D - 241 315 IPR023282 GO:0004420
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 332 352 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 423 441 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 514 540 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 305 326 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 463 488 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 PRINTS Hydroxymethylglutaryl-coenzyme A reductase signature 568 589 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 SUPERFAMILY Substrate-binding domain of HMG-CoA reductase 241 638 IPR009029 GO:0015936|GO:0016616
Phco8g00309 659 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 241 315 - -
Phco8g00309 659 ProSitePatterns Hydroxymethylglutaryl-coenzyme A reductases signature 2. 580 587 IPR023076 GO:0004420
Phco8g00309 659 NCBIfam hydroxymethylglutaryl-CoA reductase (NADPH) 245 649 IPR004554 GO:0004420|GO:0005515|GO:0008299
Phco8g00309 659 CDD HMG-CoA_reductase_classI 254 649 IPR004554 GO:0004420|GO:0005515|GO:0008299
Phco8g00309 659 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 366 482 - -
Phco8g00309 659 MobiDBLite consensus disorder prediction 206 229 - -
Phco8g00309 659 Gene3D - 366 482 IPR009023 -
Phco8g00309 659 ProSiteProfiles Hydroxymethylglutaryl-coenzyme A reductases family profile. 245 649 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 Pfam Hydroxymethylglutaryl-coenzyme A reductase 273 649 IPR002202 GO:0004420|GO:0015936
Phco8g00309 659 FunFam 3-hydroxy-3-methylglutaryl coenzyme A reductase 468 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00309 Phco-Chr8 2824671 2828013 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00309 8 2824671 2828013 Phco8g00309 8 2824671 2828013 ECH
Phco4g00739 4 5655920 5659517 Phco8g00309 8 2824671 2828013 PCT