Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00308 ATGAGAATTTTCTCAAACACCTTCTTCACCAAAGCCCGCAACCTCATAGGCTTCGGGCTCGCGTCCACCGCCGCCGCAGCTACAATGGCGGCCTCCAATTCCTCCGTGTCTTCTTCCGCTTCTTCTTCTCCTTCATCCACCGCCTCTTCTACCTCTTCTTTCGATGCCGACGATACTTCTTCCTCCGATGTCGAAATCGTCCCCCAGAAAATACTGAAAACGAAGCTCTGCATCATCGGAAGTGGCCCGGCGGCGCACACGGCCGCCATTTACGCGGCGCGAGCGGAGCTGAAGCCGGTCCTCTTCGAAGGATGGATGGCGAATGGCGTCGCTCCCGGCGGCCAGCTCACCACCACCACCGACGTTGAGAACTTTCCGGGATTTCCAGCCGGCATCCTCGGCGCCGAGCTTATGGACCGCTGCCGCGAGCAGTCGCAGCGCTTTGGCGCTGAGGTCATCACGGAGACAGTGACGACAGTGGACTTCTCCGAAAAGCCGTTTAGGGTTTTCACCGACTCCACCACCGTGGAAGCTGAATCCGTCATCGTCGCCACCGGGGCTGTTGCTAAGCGGCTGAATTTCGTCGGCGCGGGTGACGGTCCTGACGGTTTCTGGAACCGCGGGATATCGGCGTGCGCCGTGTGTGACGGTGCCGCGCCGATATTCCGTGCCAGGCCTCTGGCGGTGATCGGCGGCGGAGATTCTGCTATGGAGGAAGCTGGCTTCCTCTCCAAGTTTGGTTCCAAGGTTTATGTAATTCATAGAAGGGACAAGTTTAAGGCTTCTAAGATCATGCAGGGGAAGCTGATGAATAATCCCAAAATTGAAGTGTTGTGGAATTCAACAGTGGTTGGGGCTTATGGGGATAATAAGGGTGGGGTTCTTGGTGGGGTGAAGGTGAAGAATGTGGTGACTGGGGTTGTTTCTGATTTGAAGGTTTCTGGTTTGTTCTTTGCAATTGGGCATGAGCCTGCCACGAAATTCTTGGATGGTCAACTTGAATTAGACTCTGATGGGTACATTGTGACCAAACCTGGCACCACAAAGACTAGTGTTGATGGAGTTTTTGCTGCTGGTGATGTGCAGGACAAGAAGTATAGGCAAGCTATTACCGCAGCTGGAACTGGGTGTATGGCAGCCTTGGATGCAGAACATTACTTGGAAGAGATTGGTTTGCAGGATGGTAGGAGTGTTTGA 1197 0.543 MRIFSNTFFTKARNLIGFGLASTAAAATMAASNSSVSSSASSSPSSTASSTSSFDADDTSSSDVEIVPQKILKTKLCIIGSGPAAHTAAIYAARAELKPVLFEGWMANGVAPGGQLTTTTDVENFPGFPAGILGAELMDRCREQSQRFGAEVITETVTTVDFSEKPFRVFTDSTTVEAESVIVATGAVAKRLNFVGAGDGPDGFWNRGISACAVCDGAAPIFRARPLAVIGGGDSAMEEAGFLSKFGSKVYVIHRRDKFKASKIMQGKLMNNPKIEVLWNSTVVGAYGDNKGGVLGGVKVKNVVTGVVSDLKVSGLFFAIGHEPATKFLDGQLELDSDGYIVTKPGTTKTSVDGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLEEIGLQDGRSV 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00308 398 PRINTS FAD-dependent pyridine nucleotide reductase signature 178 196 - -
Phco8g00308 398 PRINTS FAD-dependent pyridine nucleotide reductase signature 76 95 - -
Phco8g00308 398 PRINTS FAD-dependent pyridine nucleotide reductase signature 313 329 - -
Phco8g00308 398 PRINTS FAD-dependent pyridine nucleotide reductase signature 340 362 - -
Phco8g00308 398 PRINTS FAD-dependent pyridine nucleotide reductase signature 226 244 - -
Phco8g00308 398 MobiDBLite consensus disorder prediction 35 60 - -
Phco8g00308 398 NCBIfam thioredoxin-disulfide reductase 75 387 IPR005982 GO:0004791|GO:0005737|GO:0019430
Phco8g00308 398 FunFam Thioredoxin reductase 198 325 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 134 144 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 205 217 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 75 97 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 113 128 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 179 187 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 315 336 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 350 368 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 222 246 - -
Phco8g00308 398 PRINTS Pyridine nucleotide disulphide reductase class-II signature 274 290 - -
Phco8g00308 398 PANTHER THIOREDOXIN REDUCTASE 1-RELATED-RELATED 74 389 - -
Phco8g00308 398 ProSitePatterns Pyridine nucleotide-disulphide oxidoreductases class-II active site. 212 234 IPR008255 GO:0016491
Phco8g00308 398 Pfam Pyridine nucleotide-disulphide oxidoreductase 75 375 IPR023753 GO:0016491
Phco8g00308 398 Gene3D - 78 386 IPR036188 -
Phco8g00308 398 Gene3D - 194 325 IPR036188 -
Phco8g00308 398 SUPERFAMILY FAD/NAD(P)-binding domain 69 387 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00308 Phco-Chr8 2819967 2822426 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00738 4 5641024 5646878 Phco8g00308 8 2819967 2822426 PCT