Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00264 ATGGAACCGAAAACCCCATTAGAGAGTTCTTCCAATCTTGACTCTGTAATTTTCAATTCATCATCACGTAGAAGTACCCTGTCCACTCACTCCAGGAGTTCTGGTGTTAACAACTCCACCAGGGAAGTGAGTTTTGGCTACTCAGGATCCAAGCCTCCGATATATGGGTCAAAGGGTGCTGATTCCGAGGCTCTCAGTATGTCTCAGAAGGAATTCAGTGATGAGGATGCAAGGTTGGTTTATGTTGATGATCCCGAGAAGACAAATGAAAGGCTTGAATTTGCAGGGAATTCGATTCTTACTGGAAAGTACTCCATCCTCACCTTTCTTCCAAGGAATTTGTTTGAACAGTTTCATAGAGTTGCTTATATTTACTTCCTTGCAATTGCCATTCTTAATCAGCTCCCTCAGTTAGCTGTTTTTGGGAGGGGTGTTTCCATTTTGCCATTGGCCTTTGTGCTTCTGGTTACTGCTGTGAAGGATGCCTTTGAGGACTGGAGGAGGCACAGGTCAGACAAAATTGAGAACAACAGGCTAGGATTGGTTTTGGTTAATGATAAGTTTGTAGAGAAGAAATGGAAGCATATTAGAGTTGGGGAAGTTATTCAAATCAGAGCAAATGAAACCATTCCTTGTGATGTTGTGTTGCTCTCGACTAGTGACCCCACTGGGGTTGCTTATGTACAGACTCTTAATCTGGATGGAGAGTCTAATTTGAAAACTAGGTATGCAAAGCAAGAGACTCAATCTAAGTTGCCAGAAAAGGAGAAGTTAAATCTGTTGATTAAGTGTGAGAAACCCAATAGGAATATATACGGGTTTCACGGTAATATAGAAGTTGACGGAAAGAGGTTGTCTCTTGGATCCTCTAACATTGTCCTTAGAGGCTGTGAGCTCAAGAATACTAATTGGGCACTGGGAGTTGCCGTGTATTGTGGCGCTGAGACCAAAGCCATGCTCAACAGCTCAGGAGCTCCATCCAAAAGGAGTCTTCTTGAGTCTCGCATGAACTCTGAGATCATTATGCTTTCTTTCTTTCTTATAGCTTTGTGTACAGTGACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCGCCACAAGGATGAGTTGAATCTCTCGCCTTATTATAGGAAGCTGGATTTTTCAACGGGGGAAGAGGAAAACTATAAATATTATGGATGGGCACCGGAAATTGTTTTCACTTTTCTCATGTCAGTTATAGTGTATCAGGTTATGATCCCTATATCCTTGTACATTTCGATGGAGCTTGTCCGTGTTGGTCAGGCATACTTCATGATCGGAGACTCGAGAATGTATGATAAGGATACAAAGTCAAGATTTCAGTGCAGAGCTTTGAATATTAACGAAGATTTAGGCCAAATTAAATATGTCTTTTCTGACAAAACTGGCACACTGACTGAGAACAAGATGGAGTTTCAATGCGCAAGCATCTTGGGGTTTGATTACAGTTCAACGGCGGCGGTTCTTGAGAATGAGCAAGTTGAATACTCTGTTCAAGCGGATGGGACGGTCTTTAAGCCAAAGATGATGGTGAAAGTTAATCAAGAGCTTTTGCAATTATCAAAAAGTGGATTTACAAATGAAGAGGGGAAACAGGTTTTTGATTTCTTTCTAGCATTGGCAGCCTGCAATACCATTGTGCCTCTTGTTGTTGACACATCTGACCCTATGGTCAAGCTGATAGATTACCAAGGGGAATCACCGGATGAACAAGCATTGACTTATGCTGCCGCTGCTTATGGTTTTATGCTTATTGAACGAACCTCAGGTCACATAGTCCTTGATATTCGTGGAGAGAGGCAAAGGTTCAATGTCTTAGGTTTGCATGAATTTGATAGTGATCGAAAAAGGATGTCAGTTATACTGGGCTACAGTGACAATTCTGTGAAACTTTTTGTTAAAGGGGCAGATACATCCATGCTTAGATTGATTGACAAATCATTGAACACAGACATACTACAAGCAACTAAAACTCATCTTCATTCTTATTCCTCTGTGGGTTTGAGGACACTTGTTATTGGTGTCCGGGACTTAGATGCTTCAGAATTTGAGCAATGGCGCACTGCCTTTGAGGTAGCAAGTACTGCTTTGATGGGTAGGGCAGCTTTGCTTCGCAAGGTCTCTATCAATATAGAGAGGGATCTCTGCATATTGGGTGCAACTGCTATTGAAGATAAGCTGCAGCAAGGTGTGCCAGAATCTATTGAGTCTCTAAGGACTGCAGGTATTAAAGTATGGGTCTTGACTGGGGACAAACAGGAAACTGCCATATCCATTGGATACTCCTCTAAGCTCCTAACGAGCAACATGATTCAAATTATAATCAATACCAACAATAGAGAGTCATGTAGAAGACGTTTACAAGATGCCCTTGTCATGTCTAGACAACACATGCCTGTGCCTGGGGTTACTCACAATTCAGAAGGAAGTTCAGGATCCGTTTCAACTCTAGCCTTGATTGTTGATGGTACCAGCCTTGTTTATATTCTTGACAATGAGCTTGAAGAAGAATTCTTTCAACTTGCAATTAGATGTTCTGTTGTTCTCTGTTGTCGAGTGGCTCCACTACAGAAGGCTGGGATTGTTGCCCTTGTGAAGCATAGAACAGATGACATGACGCTGGCCATTGGAGATGGTGCTAATGATGTATCGATGATCCAAATGGCTGATATTGGAGTTGGAATCAGTGGACAGGAAGGTCGGCAAGCTGTAATGGCTTCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTGCCTCTCTTATTGATACATGGGCATTGGAATTACCAACGACTGGGTTACATGATAATATACAACTTTTACAGAAATGCTATCTTTGTTTTTGTCCTATTTTGGTATGTGCTCTTTACTGCCTCCACATTGACAACTGCTATAAATGAATGGAGCAGCATGCTATACTCAATAGTCTACACTGCGGTGCCAACTATTGTTGTTGGTATTCTCGACAAGGATCTTAGTAAAAGGACTCTCCTAAAGAATCCTCAGCTTTATGGGTCTGGGCTGAGACATGAGGCCTACAACAAAAAACTGTTTTGGTTGACAATGGCCGATACTCTGTGGCAAAGCATTGCTGTCTTCTTTACTCCCCTTATCGCATATTGGAGAACCAGTGTAGACGTAGCAAGCATAGGTGATCTTTGGACTCTTGCAGTAGTTATTTTGGTTAATTTGCATCTGGCCATGGATGTCATCAGGTGGAATTGGATTACTCATGCAGCCATTTGGGGCTCTATTGTTGCAACTTTCATATGTGTCATGGTTATTGATGCTATACCAGCCTTTCCTGGTTACTGGGCTATCTTTGATATTGCAGGCACTGCATTGTTCTGGTTATGTTTGCTTGGAATTGTAATAGCCGCATTACTTCCCCGACTAGTTGTAAAATATCTTTACCAGTATTATTTTCCCAGTGATATTCAGATTTCAAGAGAAACTGAGAAGTTTGGGAATCCAAGAGACAATGGAGGAGGGCAGATAGAAATGCTTCCTGTTTCAGATAGTCAACTGAGATAG 3552 0.4181 MEPKTPLESSSNLDSVIFNSSSRRSTLSTHSRSSGVNNSTREVSFGYSGSKPPIYGSKGADSEALSMSQKEFSDEDARLVYVDDPEKTNERLEFAGNSILTGKYSILTFLPRNLFEQFHRVAYIYFLAIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKIENNRLGLVLVNDKFVEKKWKHIRVGEVIQIRANETIPCDVVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKLPEKEKLNLLIKCEKPNRNIYGFHGNIEVDGKRLSLGSSNIVLRGCELKNTNWALGVAVYCGAETKAMLNSSGAPSKRSLLESRMNSEIIMLSFFLIALCTVTSVCAAVWLKRHKDELNLSPYYRKLDFSTGEEENYKYYGWAPEIVFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIGDSRMYDKDTKSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSTAAVLENEQVEYSVQADGTVFKPKMMVKVNQELLQLSKSGFTNEEGKQVFDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALTYAAAAYGFMLIERTSGHIVLDIRGERQRFNVLGLHEFDSDRKRMSVILGYSDNSVKLFVKGADTSMLRLIDKSLNTDILQATKTHLHSYSSVGLRTLVIGVRDLDASEFEQWRTAFEVASTALMGRAALLRKVSINIERDLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSNMIQIIINTNNRESCRRRLQDALVMSRQHMPVPGVTHNSEGSSGSVSTLALIVDGTSLVYILDNELEEEFFQLAIRCSVVLCCRVAPLQKAGIVALVKHRTDDMTLAIGDGANDVSMIQMADIGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVFVLFWYVLFTASTLTTAINEWSSMLYSIVYTAVPTIVVGILDKDLSKRTLLKNPQLYGSGLRHEAYNKKLFWLTMADTLWQSIAVFFTPLIAYWRTSVDVASIGDLWTLAVVILVNLHLAMDVIRWNWITHAAIWGSIVATFICVMVIDAIPAFPGYWAIFDIAGTALFWLCLLGIVIAALLPRLVVKYLYQYYFPSDIQISRETEKFGNPRDNGGGQIEMLPVSDSQLR 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00264 1183 MobiDBLite consensus disorder prediction 21 47 - -
Phco8g00264 1183 FunFam Phospholipid-transporting ATPase 152 321 - -
Phco8g00264 1183 SUPERFAMILY Calcium ATPase, transduction domain A 179 318 IPR008250 -
Phco8g00264 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 470 736 IPR023299 GO:0000166
Phco8g00264 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 1149 IPR023298 -
Phco8g00264 1183 Gene3D - 720 922 IPR023214 -
Phco8g00264 1183 NCBIfam HAD-IC family P-type ATPase 397 485 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco8g00264 1183 NCBIfam HAD-IC family P-type ATPase 852 966 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Phco8g00264 1183 NCBIfam phospholipid-translocating P-type ATPase 94 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Phco8g00264 1183 SFLD p-type atpase 448 933 IPR044492 -
Phco8g00264 1183 FunFam Phospholipid-transporting ATPase 720 922 - -
Phco8g00264 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 466 472 IPR018303 -
Phco8g00264 1183 SUPERFAMILY HAD-like 451 923 IPR036412 -
Phco8g00264 1183 CDD P-type_ATPase_APLT_Dnf-like 96 1042 - -
Phco8g00264 1183 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Phco8g00264 1183 PRINTS P-type cation-transporting ATPase superfamily signature 464 478 - -
Phco8g00264 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 76 1160 - -
Phco8g00264 1183 FunFam Phospholipid-transporting ATPase 568 701 - -
Phco8g00264 1183 Pfam Phospholipid-translocating ATPase N-terminal 80 145 IPR032631 -
Phco8g00264 1183 Pfam Cation transport ATPase (P-type) 572 647 - -
Phco8g00264 1183 Gene3D - 562 702 IPR023299 GO:0000166
Phco8g00264 1183 MobiDBLite consensus disorder prediction 21 46 - -
Phco8g00264 1183 SFLD Haloacid Dehalogenase 448 933 - -
Phco8g00264 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Phco8g00264 1183 MobiDBLite consensus disorder prediction 1162 1183 - -
Phco8g00264 1183 Gene3D - 157 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00264 Phco-Chr8 2407566 2413302 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00264 8 2407566 2413302 Phco8g00264 8 2407566 2413302 ECH