Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00258 ATGACACTTCCGAGTTTACATTTCTTAATGGGGTGGTTCAGTGGTACGCGTACTGAGGAGTTATCTTCCCCAAGGGAAAATCACACGAGGAGAGTCTCTGTTCTTCCTCTAGTATTTCTCATCTTCTATGAGGTTTCTGGGGGACCCTTTGGTGTTGAGGACACTGTGAATGCAGCAGGTCCTCTGTTAGCCCTTTTGGGGTTCTTGGTTTTTGCAGTCATATGGAGTGTTCCTGAGGCTCTTATCACTGCAGAGATGGGTACAATGTTCCCAGAGAACAGTGGTTATGTGGTTTGGGTCTCTTCTGCCCTGGGTCCCTTTTGGGGGTTTCAGCAAGGTTGGATGAAATGGCTAAGTGGGGTGATTGATAATGCTTTGTACCCGGTTCTGTTTCTCGACTATTTGAAAGCTGGAATCCCTGCATTGGGTGGTGGGGTTCCCAGAACCATTTCAACTTGGGCCTTAACTGTGATTCTCACTTGCTTGAACTATAGGGGTTTAACCATTGTGGGAACGGTTGCTGTTTTTTTAGGAATTTTCTCACTCCTTCCTTTTGTGGTTATGGGATTCTTGTCAATTCCAGACTTGAAACCTTCAAGATGGTGTGTGGCAAATCTTGATGATGTTGATTGGAATCTGTATTTGAATACTTTGTTTTGGAATCTCAATTATTGGGACTCTATTAGTACTCTTGCTGGAGAAGTGGAAAATCCAAGGAGAACTCTTCCCAAGGCTCTATTTTATGCTTTGATCCTTGTAGTTCTGAGCTATTTCTTCCCTCTTTTGATTGGCACTGGAGCTGTTCCCCTGAAAAGGGAGTTGTGGACTGATGGGTACTTCTCAGATATTGCTGAGATTGTTGGAGGAGTGTGGTTGAGGTGGTGGCTTCAGGCTGCTGCTGCAATGTCAAACATGGGAATGTTTGTTGCTGAAATGAGTAGCGACTCTTTCCAGCTTCTAGGAATGGCTGAGAGGGGCATGTTACCTGAGTTCTTTGGCAAGAGGTCTCGTTATGGAACTCCTCTCGTAGGAATACTCTTTTCTGCCTCTGGTGTGATTTTACTCTCATGGCTGAGTTTTCAAGAGATTGTGGCTGCTGAAAACTTCTTGTACTGTTTTGGGATGATTTTGGAGTTTGTGGCATTCATATTGTTGAGGATCAAGCACCCCAACGCTTCTAGACCTTACAAGATTCCAGGGGGAACAGCTGGAGCAGTTGCTATCTGCATTCCTCCCACAATTTTGATCTGTGTTGTGCTGGCTTTTTCCACCAACAAAGTACTTGTTATAAGCCTCATTGCCGTTCTGATTGGCCTTGTAATGCAACCTTGTCTCAAGATTCTGGAGGAAAGAAGATGGATTAAATTCTCAGTTAGGTATGAACTCCAGGATCTTGACAATCAAGAGAGCACTCACTCCTTCATGGGTTAG 1431 0.4451 MTLPSLHFLMGWFSGTRTEELSSPRENHTRRVSVLPLVFLIFYEVSGGPFGVEDTVNAAGPLLALLGFLVFAVIWSVPEALITAEMGTMFPENSGYVVWVSSALGPFWGFQQGWMKWLSGVIDNALYPVLFLDYLKAGIPALGGGVPRTISTWALTVILTCLNYRGLTIVGTVAVFLGIFSLLPFVVMGFLSIPDLKPSRWCVANLDDVDWNLYLNTLFWNLNYWDSISTLAGEVENPRRTLPKALFYALILVVLSYFFPLLIGTGAVPLKRELWTDGYFSDIAEIVGGVWLRWWLQAAAAMSNMGMFVAEMSSDSFQLLGMAERGMLPEFFGKRSRYGTPLVGILFSASGVILLSWLSFQEIVAAENFLYCFGMILEFVAFILLRIKHPNASRPYKIPGGTAGAVAICIPPTILICVVLAFSTNKVLVISLIAVLIGLVMQPCLKILEERRWIKFSVRYELQDLDNQESTHSFMG 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00258 476 Pfam Amino acid permease 38 438 IPR002293 GO:0016020|GO:0022857|GO:0055085
Phco8g00258 476 Gene3D Amino acid/polyamine transporter I 26 454 - -
Phco8g00258 476 FunFam Amino acid permease, putative 28 457 - -
Phco8g00258 476 PIRSF AA_transporter 17 469 - -
Phco8g00258 476 PANTHER POLYAMINE TRANSPORTER PUT1 22 469 IPR044566 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00258 Phco-Chr8 2373830 2375260 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00258 8 2373830 2375260 Phco8g00258 8 2373830 2375260 ECH
Phco4g00651 4 4914037 4915584 Phco8g00258 8 2373830 2375260 PCT