Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00252 ATGGCATTGTTGCCTCAAACGTGTCACTCTCTCTCTCTATGCTCACCGCGATACCCTTATCACTTCCCAAACCCTTATTATCATAATCCCTTTCTCATAATCCCCGCCACATCCACTAAATCCCTATCCTCATTTCATGCGCCAACAATTTCATTCTCCGCTCACCCAACTACCTCACGCGGTTCGCCACCCTCATCCACTGCCTCTGCTTCTTCCCACCGCAAGCCACCTCCACAAACGCAACCACTCAAGGCTTTTGCGGGCCTCGCCGCCTCCGCCGTGCTGTTTCTCTGCTTCGGCGTTCGCCTGTGCTTGGCCTCTTCGCCGCCGCCGCCTCTACCTGCCGGTCCTACCGTTGTTCAAGAGGACCAAACTGTTCAAGATGATCATGATGGAAGAAAACAAGATGACAAAGAAACTATAGTAGATAGAGAATTAGAAGAAGCTTTTAATACCTGGAAATCTAAATCATTTGCTTTGACTGTTCCCCTGAAAGTTGTTGCTCTTCGTGGTTCTGTACCTCCTTCATGGATCAAGGACTTTATAAATTGTCAAGGAAGGAGAATGAAGTTTAACGTGAAGTATTATGCAAGTCTTGAGAGCATCTTTTCTGACCTAACAATTCCCTTTACTAAAGGAAAAATTGGTCCAGCTTCTGCTTTGGCAGCAGATATTGTTGGTATTGGCGATTCATGGCTCAAATCTGCTATAAATAAAGCTATAATTGAGCCAATAAGAGATGTAGAAGATCAGGAGTGGTTTAAAAGCTTAAATGACAAATGGAAGGTATACCTACGCAGGAACTCTGAGGGAGAAATAGATCCTAAAGGTGTTATATGGGCTGCTCCATATCGATGGGGCTGCATGGTAATAGCATACAAGACAAATAAATTTCAAGAGCATAAGTTGGCTCCTGTAGAGGACTGGGCAGATCTTTGGCGGCCAGATCTTGCCGGGAGGATTTCAATGGTTGATTCTCCTAGAGAAGTTGTTGGTGCAGTTTTGAAGTATATGGGGACTTCCTATAATACAATTGACATCAATGCTGAAGTAAACGGTGGGAGAGATGCTGTTAAACATAATTTGGCTTTGCTTGCAAAACAGGTTCGACTGTTTGATAGTTCAAACTATCTAAAAGCTTTTGGAGTTGGAGACGTGTGGGTAGCTGTTGGATGGAGTAGTGATATTATTCCTGCCGCTAAACGCCTGTCTGATGTGGCTGTTGTTGTTCCAAAGTCTGGAGCGAGCTTATGGGCTGATCTTTGGGCAATTCCGGCTGCATCTAGGATTGAAACAAATCGGATTGGTGGACGTGTCAGGGGACCGTCCCCATTAATCCATCAGTGGATTGAGTTTTGTCTGCAATCTGCAAGAGCTCTCCCCTTTAAGCAAGAGGTGATCCCAGGTGCCTCTCCCTCACATCTTCAAGTTCATTCAGCCAATGTGCCCGTCGAGTTAACCAATGGTAGGCCAAAGCTAAAGGGTAACCTAGTTGATGGAGCACCTCCACCAGACATCTTAGAAAGGTGTGAGTTTCTAGAGCCATTATCTAATTCGACATTGTCAGATTACCATTGGTTGATTACCTCTATCCAGGAACCTGGCCATGGATTGATACAGAAAATGTATCATAATATCATATCAGTGGCTAAATTTTCTGGGTGGTTTAATTCAAAGCTTACTTGA 1686 0.446 MALLPQTCHSLSLCSPRYPYHFPNPYYHNPFLIIPATSTKSLSSFHAPTISFSAHPTTSRGSPPSSTASASSHRKPPPQTQPLKAFAGLAASAVLFLCFGVRLCLASSPPPPLPAGPTVVQEDQTVQDDHDGRKQDDKETIVDRELEEAFNTWKSKSFALTVPLKVVALRGSVPPSWIKDFINCQGRRMKFNVKYYASLESIFSDLTIPFTKGKIGPASALAADIVGIGDSWLKSAINKAIIEPIRDVEDQEWFKSLNDKWKVYLRRNSEGEIDPKGVIWAAPYRWGCMVIAYKTNKFQEHKLAPVEDWADLWRPDLAGRISMVDSPREVVGAVLKYMGTSYNTIDINAEVNGGRDAVKHNLALLAKQVRLFDSSNYLKAFGVGDVWVAVGWSSDIIPAAKRLSDVAVVVPKSGASLWADLWAIPAASRIETNRIGGRVRGPSPLIHQWIEFCLQSARALPFKQEVIPGASPSHLQVHSANVPVELTNGRPKLKGNLVDGAPPPDILERCEFLEPLSNSTLSDYHWLITSIQEPGHGLIQKMYHNIISVAKFSGWFNSKLT 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00252 561 MobiDBLite consensus disorder prediction 124 138 - -
Phco8g00252 561 SUPERFAMILY Periplasmic binding protein-like II 164 429 - -
Phco8g00252 561 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 278 294 IPR001188 GO:0015846|GO:0019808|GO:0042597
Phco8g00252 561 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 411 430 IPR001188 GO:0015846|GO:0019808|GO:0042597
Phco8g00252 561 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 325 344 IPR001188 GO:0015846|GO:0019808|GO:0042597
Phco8g00252 561 PRINTS Bacterial periplasmic spermidine/putrescine-binding protein signature 307 321 IPR001188 GO:0015846|GO:0019808|GO:0042597
Phco8g00252 561 PANTHER SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN 87 531 - -
Phco8g00252 561 MobiDBLite consensus disorder prediction 53 78 - -
Phco8g00252 561 Pfam Bacterial extracellular solute-binding protein 223 458 - -
Phco8g00252 561 MobiDBLite consensus disorder prediction 53 82 - -
Phco8g00252 561 CDD PBP2_PotD_PotF_like_1 163 529 - -
Phco8g00252 561 Gene3D - 287 438 - -
Phco8g00252 561 MobiDBLite consensus disorder prediction 114 138 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00252 8 2345444 2351409 Phco8g00252 8 2345444 2351409 ECH