Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00248 ATGGCCATAAGCCCCAGATCAGAATCCATTTGGTTTGCCCTAATTCTCTTAGGAATCTTTGATTTGTTCATCTTCTCCGAAGCCACTACTCTTGAACTCATTCACACTGATTCCCCTTTGTCTCCCTTCTACGACCCTTCACTCACCAACTCTGATCGCTTGCGCAATGCTTTTCAAAGCTCATTGAACCGCGTCAACAGTTTCAGAGTTCCTGTTGCTAACCTTAACCATGGCAACGCACAATCCCCTATGATAACCGACATAGGAGGATACGTCATGAAATACTCCATTGGAACTCCACCAGTTGAGGCTTTCGGCTTCGCTGACACGGGCAGTGACCTCATATGGACACAGTGCCTGCCATGCAAACAATGTTACAACCAAACTGCTCCTCTCTTTGATCCTTCCAATTCCAAATCATACACCAACTTGCCATGCAATTCCTCATTTTGCAGCTCCAGATATTTATTAGACAGTCCAGAATGTGACCAGAATGGGTCATGTGTGTATCATTATTCTTACTTTGATCGTTCTCACACTGCGGGAAACCTTGCCACTGAAACCCTAACCATAGGCGAAGAAAACCCAATTACTTTTCCAAACACTGTATTTGGGTGTGCACACGACACTACAGGCAAATTCAAGCCGGCTGAGTCAGGACTCATTGGTCTTGGTCGTGGCAACCTTTCCCTACTTTCTCAACTTGGTATCAAAAAGTTATCTTATTGTCTTGCTCCCAACAACAGGAACTACACTAGCAAGATTGTTTTCGGTGAAGATGCTATGCTTTCTGGTTCTGATGTGGTTAGCACTCCTTTTAGAGTAGATTATGCACCTGAGTACCTAATCACATTGGAGGGATTAAGTGTAGAGGGAGATAGGATTGAATTTGAATCTGCAAACAATGTGAGTGAGGGAAATGTGGCCATTGATTCTGGAACAACGTTCACTTTTCTGCCACCACCCATTTATGATGCTTTGGTAGCTGCTTTGGACATGAGAATAAAGGCTCCGAAGGGGAGTGACCCCGATGGTGTTCTTCCCCATTGTTATGAATTTCCTGACCAAAACGTGTCATTTCCCATAATCACAGCACATTTTAAGGGAGCAGATGTGAAGTTGATGGGAATTAATACATTCTATTGGGTGAGTGAGAAAGTGGTATGTTTGTCAATGGTTCCTGCTGGTGAAGGTATTATTGGTTTCTTTGGAAACATTGCTCAATCCAATTTCTGGATTGGATATGACCTTGATGCTGCTACTGTCTCCTTTAAGCCTGCTGATTGTTCCCTCTGA 1296 0.4367 MAISPRSESIWFALILLGIFDLFIFSEATTLELIHTDSPLSPFYDPSLTNSDRLRNAFQSSLNRVNSFRVPVANLNHGNAQSPMITDIGGYVMKYSIGTPPVEAFGFADTGSDLIWTQCLPCKQCYNQTAPLFDPSNSKSYTNLPCNSSFCSSRYLLDSPECDQNGSCVYHYSYFDRSHTAGNLATETLTIGEENPITFPNTVFGCAHDTTGKFKPAESGLIGLGRGNLSLLSQLGIKKLSYCLAPNNRNYTSKIVFGEDAMLSGSDVVSTPFRVDYAPEYLITLEGLSVEGDRIEFESANNVSEGNVAIDSGTTFTFLPPPIYDALVAALDMRIKAPKGSDPDGVLPHCYEFPDQNVSFPIITAHFKGADVKLMGINTFYWVSEKVVCLSMVPAGEGIIGFFGNIAQSNFWIGYDLDAATVSFKPADCSL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00248 431 PANTHER OS07G0603500 PROTEIN-RELATED 31 429 - -
Phco8g00248 431 FunFam Probable aspartic protease At2g35615 72 258 - -
Phco8g00248 431 CDD pepsin_A_like_plant 90 429 IPR034161 -
Phco8g00248 431 SUPERFAMILY Acid proteases 86 429 IPR021109 -
Phco8g00248 431 FunFam Aspartic proteinase CDR1 260 431 - -
Phco8g00248 431 Pfam Xylanase inhibitor C-terminal 280 425 IPR032799 -
Phco8g00248 431 Gene3D Acid Proteases 256 431 IPR021109 -
Phco8g00248 431 Gene3D Acid Proteases 61 255 IPR021109 -
Phco8g00248 431 ProSiteProfiles Peptidase family A1 domain profile. 91 425 IPR033121 -
Phco8g00248 431 Pfam Xylanase inhibitor N-terminal 91 258 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00248 Phco-Chr8 2319208 2320503 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00248 8 2319208 2320503 Phco8g00248 8 2319208 2320503 ECH