Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00227 ATGGGAACAGTTTCAGGGAGAGAGATATGGAAAGCACACACGTCGTTGGTGATGGTGCAGGTGTTTAGCGGAGGCTATCACGTTATCTCGAAATCGGTTCTTGACGTTGGCATCAACCAAATCGTTTACTGCGTCTTCCGCGATCTCATTGCCTTCCTCATTCTCGCTCCCATCGCTTATATCCGTGAAAGAAAGAGTTGTAATCTGATAAAATCTAAGCTAATAGTGATGGCAACAGTGTCAGGGGGTGAGATATGGAAGGCCCACACTGCCATGGCAATGGTGCAGTTATTCAACGGAGGCTATCACGTCATCACCAAAGTCGCCCTAAATGTTGGAGTCAACCAAATCGTCTTCTGCGTCTTCCGCGATATCATTGCCCTCGCCATTCTCGCTCCCCTCGCTTTTATCCGTGAAAAGCGTACACGGCCACCGATAACTAAACGCCTTCTCCTGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAGTCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTCATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCCTGTGTTTCAGGTGCTGTACTGATGGTTTTGTACCGTGGTCCACCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGCTTACTGGATCTCGGATTTGATCAATTTCATCTGGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTATTAAAAAAGTATCCAGCAAACCTATCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTAACTACATCTTTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCCGAAACAATTGCTGTTATTTATGCTGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCTGCTCTCCTGTCTAGAATTTTTCTCGGAAGTCCAATTTACATGGGAAGCATTGTAGGGGGTTCTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTATAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGGCTCTCGGGTCTCTGAATCACTTATCCATGACAAGAGTTCTTATAGAGTTAACATTTTTTCAGGCCCCCCCAGCATGTCCCCAAAGCCTTCAGATTAA 1386 0.4466 MGTVSGREIWKAHTSLVMVQVFSGGYHVISKSVLDVGINQIVYCVFRDLIAFLILAPIAYIRERKSCNLIKSKLIVMATVSGGEIWKAHTAMAMVQLFNGGYHVITKVALNVGVNQIVFCVFRDIIALAILAPLAFIREKRTRPPITKRLLLSFFFLGLTGIFGNHLLFLIGLSYTSPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVSGAVLMVLYRGPPLIGYSETDFVSHSEISAKGQPEPSGWLIGGLLDLGFDQFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIVGGSLIIIGLYAVTWASYRERHAAAAVISHGSRVSESLIHDKSSYRVNIFSGPPSMSPKPSD 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00227 461 Pfam EamA-like transporter family 93 212 IPR000620 GO:0016020
Phco8g00227 461 Pfam EamA-like transporter family 276 413 IPR000620 GO:0016020
Phco8g00227 461 PANTHER WAT1-RELATED PROTEIN 15 71 IPR030184 GO:0016020|GO:0022857
Phco8g00227 461 SUPERFAMILY Multidrug resistance efflux transporter EmrE 123 213 - -
Phco8g00227 461 SUPERFAMILY Multidrug resistance efflux transporter EmrE 332 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00227 Phco-Chr8 2112904 2128543 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00227 8 2112904 2128543 Phco8g00227 8 2112904 2128543 ECH
Phco4g00716 4 5485748 5490167 Phco8g00227 8 2112904 2128543 PCT