Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00072 ATGTCGTTGCTGCTACTGCCTCAACCGTCCACCACCCTCTCTCCGGTCACGGTCTCTGCCGTCGCCGCACGCACACCCTTCGCCACCGTCAAGCCTCAGCGGCAGAGAGAGCTCACTCCGAAAGCCACACTTTCAATCTCTCCCCCAGCTACAGCACCCAATGCAATCCCTCCGAAGAAGGTGCTGGTTCCTATCGGTCTGGGAACCGAAGAAATGGAAGCCGTTATCATGATTCACGTCCTGCGACGCGCCGGCGCTGAAGTCACCGTGGCCTCCGTGGAGCCGCTGCTCCAAGTAGAAGCCGCCGGAGGCACCAAATTAGTCGCCGACACCGACATTTCCGCGTGTTCCGATAAAATTTTTGACCTCGTTGCTTTACCCGGAGGAATGCCTGGCTCTGCAAGACTACGGGATTGCGAAGTTCTGCGAAAAATCACTAGCAAACAAGCTGAGGAAAATAGGCTCTATGGAGCTATTTGTGCTGCTCCTGCTGTCACCCTTTTGCCATGGGGCCTTCTGAAGAAAAAGAAGATAACTTGTCACCCCGCATTCTTCGACAGCCTTCCAACCTTTTGGGCCGTTAAATCAAATCTTCAGGTTTCCAGAGGACTCACAACCAGCCCGGGGCCTGGAACAACTTACCAGTTTGCTTTGTCCTTGGCCGAACAGCTATTTGGGGAGTCTGTTGCTAGGGAGGTTGCAGAATTGTTGTTGATTAGAACGGATGATGATAATGCAACTAAGGAGTTCAATAAAGTTGAATGGTCTGTTGGCCATCACACCCCTAGTGTCCTCGTACCAATTGCACATGGTTCTGAAGAGATTGATGTAGTGACTGTGGTAGATATTCTAAGGCGAGCAAAAGCTAATGTCATAGTTGCTTCAGTTGAGAAGTCTCTTGAAGTTTTGGCTTCACAAGGAACGAAAATTGTTGCTGATATATTAATTAGGGATGCTCAGGAGTCAACTCATGATTTGATTATTCTTCCAGGAGGAACTACTGGTGCTCAAAGACTAAACAAATCAAGAATTCTGAAGAAGCTTCTTAAAGAACAAAATTCAACTGGAAGAATATATGGGGCGATCTGTTCTTCACTTGCCATTCTACATAAACAAGGTTTACTTAAGGACAAGAGGGCCACAGCCCATCCCTCTGTCTTAGACAAGGTTAATGACGAAGCAATAAATGGGGCCAAAGTAGTTATTGATGGAAATTTGATCACTAGTGAGGGGCTTGCCACTGTAACATATTTTGCACTGGCCATTGTGAGCAAGCTATTTGGCAATGGAAGAGCTAGAAGTGTAGCAAAAGGCCTTGTTTTTGAGTATCCTAAGTAG 1338 0.4761 MSLLLLPQPSTTLSPVTVSAVAARTPFATVKPQRQRELTPKATLSISPPATAPNAIPPKKVLVPIGLGTEEMEAVIMIHVLRRAGAEVTVASVEPLLQVEAAGGTKLVADTDISACSDKIFDLVALPGGMPGSARLRDCEVLRKITSKQAEENRLYGAICAAPAVTLLPWGLLKKKKITCHPAFFDSLPTFWAVKSNLQVSRGLTTSPGPGTTYQFALSLAEQLFGESVAREVAELLLIRTDDDNATKEFNKVEWSVGHHTPSVLVPIAHGSEEIDVVTVVDILRRAKANVIVASVEKSLEVLASQGTKIVADILIRDAQESTHDLIILPGGTTGAQRLNKSRILKKLLKEQNSTGRIYGAICSSLAILHKQGLLKDKRATAHPSVLDKVNDEAINGAKVVIDGNLITSEGLATVTYFALAIVSKLFGNGRARSVAKGLVFEYPK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00072 445 FunFam Protein DJ-1 homolog C 54 242 - -
Phco8g00072 445 FunFam Protein DJ-1 homolog C 256 444 - -
Phco8g00072 445 SUPERFAMILY Class I glutamine amidotransferase-like 58 240 IPR029062 -
Phco8g00072 445 CDD GATase1_DJ-1 61 224 - -
Phco8g00072 445 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 58 237 - -
Phco8g00072 445 Pfam DJ-1/PfpI family 59 223 IPR002818 -
Phco8g00072 445 Pfam DJ-1/PfpI family 263 424 IPR002818 -
Phco8g00072 445 CDD GATase1_DJ-1 264 426 - -
Phco8g00072 445 Gene3D - 52 254 IPR029062 -
Phco8g00072 445 Gene3D - 257 444 IPR029062 -
Phco8g00072 445 MobiDBLite consensus disorder prediction 32 51 - -
Phco8g00072 445 MobiDBLite consensus disorder prediction 36 50 - -
Phco8g00072 445 NCBIfam DJ-1 family protein 60 235 IPR006287 -
Phco8g00072 445 NCBIfam DJ-1 family protein 264 437 IPR006287 -
Phco8g00072 445 SUPERFAMILY Class I glutamine amidotransferase-like 263 442 IPR029062 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00072 Phco-Chr8 634407 638197 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00072 8 634407 638197 Phco8g00072 8 634407 638197 ECH