Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00067 ATGTTTCACTCAATAATACATTATGCTTTCATGTCCTTGTTCACTCTGGTCCTCTCATCCTACAAAAATGCACTCTCTTCTCTCAAACCGCCATTACAGCAACCTTCAACTCATTCTCAACACACGTTCCTTCCAATGTCTTCTTTTTCTGTTCGTTTTCTGGCCCCTCCATGCTGCCCCAACTCTCGCTCCAAGACACTGCTCTGTGCCACGCCCACGGTGGCTCCGGCTGCCTCAGAGGCGGTGGAGGCGTCCAGGCTGGAGCCTAGAGTGGAGGAGAGAGATGGGTTCTGGGTTTTGAAGGAAGAGTACAGGGGGGGCATCAGCCCTCAGGAAAAGGTGAAGCTTGAGAAAGACCCCATGAAGCTTTTCATGGAAGGTGGGATTGAGGATTTGGCTAAGATGTCCCTTGAGGAAATTGAGAGCTCCAAGCACACTAAGGATGATATTGATGTTAGACTCAAGTGGCTTGGCCTTTTTCATAGGAGAAAGCATCACTATGGTAGATTTATGATGAGGCTGAAGCTTCCAAATGGGGTGACAACTAGCTCTCAGACTCGATATTTGGCGAGTGTGATCAGGAAGTACGGAAAAGATGGGTGTGCTGATGTAACAACGAGGCAGAATTGGCAAATTAGAGGTGTGGTGCTACCTGATGTGCCAGAAATTCTTAAGGGACTAGCAGAGGTTGGTTTGACAAGTCTGCAGAGTGGCATGGACAATGTGAGAAACGCTGTGGGTAACCCTCTTGCTGGCATTGACCCTGATGAGATTGTTGATACTAGACCTTACAACAACTTGTTATCTCAATTCATCACTGCCAATTCACTTGGCAACCCAGCCATGTCAAACTTGCCTAGGAAGTGGAATGTGTGTGTGGTGGGATCCCACGATCTGTTTGAGCATCCCCACATCAATGATCTGGCTTACATGCCTGCTAATAATAAGGATGGTCGTTTTGGATTCAACTTACTGGTTGGTGGTTTCTTTAGTGCCAAGAGATGTGCTGAAGCAATTCCACTTGATGCCTGGGTCTCTGCAGATGATGTAATCCCAGTTTGTAAAGCTGTCCTTGAAGCATATAGGGACCTTGGCTTCAGAGGGAACAGACAGAAAACAAGAATGATGTGGTTGATTGACGAACTCGGGATAGAAGTATTCAGGTCAGAGGTGGAGAAAAGAATGGCGGGAAAGCAGCTGGAGAGAGCCCAGGAAGATCTGGTTAAGAAACAATGGGAAAGAAGAGACTACTTAGGTGTTCATCCACAGAAACAGGAGGGTCTAAGCTATGTTGGTATTCACATTCCAGTTGGTAGAATCCAAGCAGATGAGATGGATGAGTTGGCCCGTTTGGCAGATGAATATGGCACTGGTGAGCTCAGGCTAACAGTGGAGCAAAACATAATAATCCCCAATGTGGACAACTCAAAACTTGAGGCCTTGCTCAAAGAGCCTCTCTTGAAAGACAAGTTTTCACCTGAACCTTCTCTCCTAATGAAAACATTGGTGGCTTGCACTGGTAACCAGTTTTGTGGGCAAGCTATAATTGAGACAAAGGCCAGGGCATTGAAAGTTACTGAGGAAGTGGAGAGGCAAGTGGCTGTGACTAGGCCTGTGCGAATGCATTGGACTGGTTGCCCCAATACCTGTGGTCAGGTACAAGTTGCAGATATTGGTTTCATGGGGTGCATGGCTAGGGATGAGAATGGTAAAGCCACTGAAGGTGTGGATATTTTTCTGGGAGGGAGAATTGGAAGTGATTCACATTTAGCTGAGTTGTATAAGAAGGGTGTGCCTTGCAAGAATTTGGTGCCTATTGTTGTAGACATACTTGTAAAACACTTTGGAGCTGTCCAAAGGAATAGAGAGGAAGGGGAAGATTAA 1884 0.4644 MFHSIIHYAFMSLFTLVLSSYKNALSSLKPPLQQPSTHSQHTFLPMSSFSVRFLAPPCCPNSRSKTLLCATPTVAPAASEAVEASRLEPRVEERDGFWVLKEEYRGGISPQEKVKLEKDPMKLFMEGGIEDLAKMSLEEIESSKHTKDDIDVRLKWLGLFHRRKHHYGRFMMRLKLPNGVTTSSQTRYLASVIRKYGKDGCADVTTRQNWQIRGVVLPDVPEILKGLAEVGLTSLQSGMDNVRNAVGNPLAGIDPDEIVDTRPYNNLLSQFITANSLGNPAMSNLPRKWNVCVVGSHDLFEHPHINDLAYMPANNKDGRFGFNLLVGGFFSAKRCAEAIPLDAWVSADDVIPVCKAVLEAYRDLGFRGNRQKTRMMWLIDELGIEVFRSEVEKRMAGKQLERAQEDLVKKQWERRDYLGVHPQKQEGLSYVGIHIPVGRIQADEMDELARLADEYGTGELRLTVEQNIIIPNVDNSKLEALLKEPLLKDKFSPEPSLLMKTLVACTGNQFCGQAIIETKARALKVTEEVERQVAVTRPVRMHWTGCPNTCGQVQVADIGFMGCMARDENGKATEGVDIFLGGRIGSDSHLAELYKKGVPCKNLVPIVVDILVKHFGAVQRNREEGED 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00067 627 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 421 484 IPR005117 GO:0016491
Phco8g00067 627 Pfam Nitrite/Sulfite reductase ferredoxin-like half domain 163 230 IPR005117 GO:0016491
Phco8g00067 627 Pfam Nitrite and sulphite reductase 4Fe-4S domain 239 396 IPR006067 GO:0016491|GO:0020037|GO:0051536
Phco8g00067 627 PRINTS Sirohaem Fe-binding site signature 500 518 IPR006066 GO:0016491|GO:0020037|GO:0051536
Phco8g00067 627 PRINTS Sirohaem Fe-binding site signature 544 562 IPR006066 GO:0016491|GO:0020037|GO:0051536
Phco8g00067 627 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 87 238 IPR036136 GO:0016491
Phco8g00067 627 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 239 397 IPR045854 -
Phco8g00067 627 SUPERFAMILY Nitrite/Sulfite reductase N-terminal domain-like 376 511 IPR036136 GO:0016491
Phco8g00067 627 Gene3D Sulfite Reductase Hemoprotein, domain 1 496 626 IPR045854 -
Phco8g00067 627 Gene3D - 108 488 - -
Phco8g00067 627 PANTHER FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC 49 627 - -
Phco8g00067 627 Pfam Nitrite and sulphite reductase 4Fe-4S domain 501 611 IPR006067 GO:0016491|GO:0020037|GO:0051536
Phco8g00067 627 ProSitePatterns Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 544 560 IPR006066 GO:0016491|GO:0020037|GO:0051536
Phco8g00067 627 SUPERFAMILY Nitrite and sulphite reductase 4Fe-4S domain-like 499 611 IPR045854 -
Phco8g00067 627 Gene3D Sulfite Reductase Hemoprotein, domain 1 231 416 IPR045854 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00067 8 600633 606268 Phco8g00067 8 600633 606268 ECH