Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00064 ATGGAAAGAAAGAAAGAAGTGCAGTCAGATTCATATTCACGAGGGAGAAAAAAAGTTGGTAGAAGGAAAAATTGCAGGACGAACAATTCAACGGCACGTGGACGTATTACAGGTCAAAAGTCCTGCGGTTCCTTTGATGCTGTGAATGATCTCTGTCTGTGCTGTTCTCGTTACTCATTCTCTCTACGCTTTCTTCTTAAACTGCAGCTATTGCATTCTGCCATGGATTTTCTCAGGACCGAGAATGCGACGCCGCACGCCTCGCAATTCTCCGCCGCGATCTACTTCGCCTTCGCCAGTTTCGCGGCCAGGTTCTTCCTTGACAGATTCGTTTTTCGCAGGTTGTCCATTAGGATGTTGACAAAGGGTAGAGCTCCATCACGTATTACTAAGGAAATGCAAGTAAAGATTGGAAAATGCTCAGAGTCAATGTGGAAGTTAACATATTATGCTGCTGTTGAAGCATTCATTCTTAAAATTACCTACCAGGAACCCTGGTTCAGTAATACGAAATTATACTTCAATGACTGGCCAAATCATGAGTTGAAGAGTTCTATGGTGTTGTACTACATGTGCCAGTGTGGGTTCTACATATATAGTATTGTTGCTATTTTGACATGGGAGACTAGAAGGAAGGATTTTTCAGTGATGTTTACCCACCATGTAATTACTGTTTTACTAATTGGGTGCTCGTATCTAACAAGTTTTTTTAGGATTGGCTCCATAATCCTCGCCCTTCATGATGCAAGTGATGTGTTCATGGAAGCTGCCAAGGTTTTCAAGTATTCTGGAAGGGAGTTTGCTGCAAGTGTGTGTTTTGGATTCTTTGCAGTTTCATGGCTCATATTGCGGCTAATTTTCTTTCCTTTTTGGGTTATTAAAGCAACAAGCATTGATCTTCAACAGTGCCTAAACCTGTCAGAAGGTTTTGACATGTTTCTCTACTACATTTTTAATACAATGCTCATAATGCTACTCATCTTCCATATATACTGGTGGAAGCTCATATGTGCAATGATCTATAGACAGCTGAAAAATAGGGGAAAAGTTGGCGAGGATATAAGATCTGGTAAGCAGGTTTCATCAATACAGATTGAGGGAGTTCAGTTGGTTAATACAACCAATGGAGAGGATCTGAAGTTTCGTTAG 1149 0.4091 MERKKEVQSDSYSRGRKKVGRRKNCRTNNSTARGRITGQKSCGSFDAVNDLCLCCSRYSFSLRFLLKLQLLHSAMDFLRTENATPHASQFSAAIYFAFASFAARFFLDRFVFRRLSIRMLTKGRAPSRITKEMQVKIGKCSESMWKLTYYAAVEAFILKITYQEPWFSNTKLYFNDWPNHELKSSMVLYYMCQCGFYIYSIVAILTWETRRKDFSVMFTHHVITVLLIGCSYLTSFFRIGSIILALHDASDVFMEAAKVFKYSGREFAASVCFGFFAVSWLILRLIFFPFWVIKATSIDLQQCLNLSEGFDMFLYYIFNTMLIMLLIFHIYWWKLICAMIYRQLKNRGKVGEDIRSGKQVSSIQIEGVQLVNTTNGEDLKFR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00064 382 Pfam TLC domain 139 337 IPR006634 GO:0016020
Phco8g00064 382 PIRSF LAG1_LAC1 28 380 IPR016439 GO:0046513|GO:0050291
Phco8g00064 382 MobiDBLite consensus disorder prediction 1 31 - -
Phco8g00064 382 MobiDBLite consensus disorder prediction 1 15 - -
Phco8g00064 382 ProSiteProfiles TLC domain profile. 138 345 IPR006634 GO:0016020
Phco8g00064 382 PANTHER LONGEVITY ASSURANCE FACTOR 1 LAG1 131 360 IPR016439 GO:0046513|GO:0050291
Phco8g00064 382 SMART lag1_27 138 345 IPR006634 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00064 Phco-Chr8 559004 564339 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00064 8 559004 564339 Phco8g00064 8 559004 564339 ECH