Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00062 ATGTTGGCTGCACTGGAACAGAGTCAGTTATGTGTTTGGGCAATGAGAAATTTTGGGGGCAAAAATTTTGAGGTGGAACCCACCGTGCATCACCTGAGGATGAGAGCCTTCTGTCTTTTTCTTCCCTTTTCAACAAAACCACCAAAAAAGCTTCCCAATTCCATAGCTTTCTCTGGTGGGGCAGTGGATTATCACACCATGAGCCCCTCCCTCTTCCTCCTATGGCTTCTCACTCTCCCTCTCCTACCCTTCTATGCCCAAGCTTCTGTTCCACCTCTAGGGTACTATTTGGACTGCGGGGGCTCCAAGGAGGTCACGGTAGATAATCTGAAATACGTTCCTGATGGAAGCTACATCAAGGTGGGAAGCACCAGCCCCATCAACAAGCCAGGCTTGTTGCCCATACTCTCCACAGTACGTTACTTTCCCGATGCATCCGCCAGAAAATATTGCTATTCGTTGCCGGTGATCAAAGGAAACAAGTACCTGGTGAAGACCATGTACTACTACGGAGGTTTCGATGGAGGGAAGGAGCCTCCGGTGTTCGATCAAATCGTTGAGGGGACGCGATGGAGCGTTGTGAACACCACTGAGGACTATGCCAAAGGTCTCAGCTCCTACTTTGACATCACGGTGGTGCCAGCGGGGAAGACCTTGAGCGTCTGCTTGGCCAGGAACTCCCACACCGGTAGCTCCAGCCCCTTCATTTCGGCCCTGGAGGTCAAGATCTTGGATGCCTCTTTGTATAATCCCGCTGACTTCACCAAGCATGCCCTTGTAACCGTTGCCAGAAGTGTCTTTGGAGGTGAAGATATCCTTGGTTTTCCAGATGACAAATTCAACCGGATGTGGCAACCATTCAAGGATCAGAATCCTGTTGTGGCATGCCAATCAAATGTAACTTCTTCAGACTTTTGGAACCTCCCTCCAGTTAAAGCATTCAACACTGGAATTACCACCAGTCGAGGGAAGACTCTTGAGATTGAGTGGCCCTCTATGTCCCTTCCAAGCACCTACTACTACATTTCTCTCTATTTCCAAGACAACAGACAACAAAGCCCTTTCAGCTGGAGGGTTTTTGACGTTTCTATTAATGGCCACCTCTTCTTTTCCAACCTTAATGCCACAGCTAAGGGTGTCACTGTTTATGCTGCTCAATGGCCACTCTCTGGTCAGACCAAAATTTCATTGACCCCTGCTGCAGGAACACCCGTTGGACCCGTCATCAATGCTGGAGAAATTTATCAGATTCTGCCTCTTGGTGGTCGAACTCACACTAGAGATGTGATTGCAATGGATGATTTGGCAAGAAGCATTCAGAATCCACCTGCTGATTGGAGCGGGGATCCTTGCCTACCTAAGGGAAATTCGTGGACTGGGGTTACATGCACTAATGGTTTTCATGCACGAGTCACCACACTGAACTTGACAAATGCCGGGCTTGGTGGGACACTTCCTCCCACCCTTGACAATCTAAGTGCATTATCTCATCTGTGGCTTGGGGGAAACAAACTCACAGGCACCATCCCAGATTTGAATGGACTGAAGGATCTAGAAACTTTGCATTTGGAGAAGAACAACTTTGAAGGACCACTTCCTCCATCAATAGGGAAACTCCCAAAACTGCGTGAAATTTATTCTGATTTTCAGGGGGAAGCTAAAGAGAAGTGA 1671 0.4829 MLAALEQSQLCVWAMRNFGGKNFEVEPTVHHLRMRAFCLFLPFSTKPPKKLPNSIAFSGGAVDYHTMSPSLFLLWLLTLPLLPFYAQASVPPLGYYLDCGGSKEVTVDNLKYVPDGSYIKVGSTSPINKPGLLPILSTVRYFPDASARKYCYSLPVIKGNKYLVKTMYYYGGFDGGKEPPVFDQIVEGTRWSVVNTTEDYAKGLSSYFDITVVPAGKTLSVCLARNSHTGSSSPFISALEVKILDASLYNPADFTKHALVTVARSVFGGEDILGFPDDKFNRMWQPFKDQNPVVACQSNVTSSDFWNLPPVKAFNTGITTSRGKTLEIEWPSMSLPSTYYYISLYFQDNRQQSPFSWRVFDVSINGHLFFSNLNATAKGVTVYAAQWPLSGQTKISLTPAAGTPVGPVINAGEIYQILPLGGRTHTRDVIAMDDLARSIQNPPADWSGDPCLPKGNSWTGVTCTNGFHARVTTLNLTNAGLGGTLPPTLDNLSALSHLWLGGNKLTGTIPDLNGLKDLETLHLEKNNFEGPLPPSIGKLPKLREIYSDFQGEAKEK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00062 556 ProSiteProfiles Leucine-rich repeat profile. 494 516 IPR001611 GO:0005515
Phco8g00062 556 Gene3D Ribonuclease Inhibitor 429 549 IPR032675 -
Phco8g00062 556 FunFam Leucine-rich repeat receptor-like kinase 427 549 - -
Phco8g00062 556 SUPERFAMILY L domain-like 427 546 - -
Phco8g00062 556 Gene3D - 93 243 - -
Phco8g00062 556 Gene3D - 261 417 - -
Phco8g00062 556 Pfam Malectin-like domain 97 417 IPR024788 -
Phco8g00062 556 PANTHER OS07G0107800 PROTEIN-RELATED 96 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g00062 Phco-Chr8 545397 551782 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00062 8 545397 551782 Phco8g00062 8 545397 551782 ECH