Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g00023 ATGTTCCCATGGCGGAATTTTGCCAAATCCGCCGAGGCCACCTTCTCGCGCTGGGCTCTGAAGAGGGTTTGCAAGTTCTTCCTCAAGAAGAAACTTGGCCAGTTCATTCTCGGCGACCTCGACCTCGACCAGCTCGACGTCCAACTCTCCAAGGGAACAATTCAGCTCTCTGATCTCGCTCTCAATGTCGATTTCGTCAACACCAAGTTTGGTAAGACATCGTCCATAGTCATCAAAGAAGGTTCAATTGGCTACCTGTTGATTAAAATGCCTTGGAGTGGTAAAGGTTGTGAGGTTGAAGTGAATGGGCTTGAATTAGTAGTTTCGCCGTGCTCAGATAAAGTGTCAACAAGTGAAGATGTAACTTGTGGCATGGATAATAGTGATAATCATCACCACAGATACAACTCAACGATGACTGAGCATGAAATATCAGATGATGCTGAGAAGTTGGCTTCAATGGATGTTCACGAAGGTGTGAAAACTATAGCAAAAATGATAAAGTGGTTGCTCACAAGCTTCCATGTTACAGTAAAAAATGTAATTGTTGCATTTGATCCATCCTTAGATAATGTAGAAAATAAGACACATCATCGTCATGCCTTAGTTCTTCAGATTTCTGAAATACAATGTGGAACTAGTCTGTCTGAAGATGCTGATTTAAATGTTGATGTCCTTGGAATAAGCCAGTTAACAAACTTTGTAAAGTTTCATGGAGCAGTTATTGAGCTTCTCCAAATAGACAATGAGGAGGATTTTTACTTTCAGCATGAATCAAGAGCAGGATGTGATGAACCTGTTTTGGGGTCAAATATAGCAACATGTCCAGTCATGACCGGGAACAAAGGTGGATTTAGTGGAAGTATTAAATTAAGTATTCCTTGGAAGAATGGCTCCTTGGACATTTGCAAGGTGGATGCTGATGCTTGTGTTGATCCCATAGTGTTAAGATTTCAGCCTAGCTCTATTAAATGGCTATTGCAATCATGGGAAACTCTTAAGAATCTGAACAAGGATGGCAAAGGTTGCAAAAATCACAACATAAGAGGATCTGCCCAGTTAAATTCTACATTGTTACGTCATTCATCAACTTCAGTTTCTATTACCAATGCTCCCAGTGGGAGTATAACTGCTGACGGTAGTTTGTCAGCTGAATATGCTTCTTTGATCCAACCTGAAACCCTTGCTGAAGATTTACTTCCTGCGGCTAATCTTATATCCGATTGGGTACCATTATCTGCTGACACAAATCATAATAAAGATGGTATTCAAGAACTTGATTTTGGGGCAAGCGTGGACCAGTTTTTTGAATGTTTTGATGGAATGAGAAATTCGCAATCAACTTTAGGAAACAGTGGAATGTGGAATTGGACATATTCAGTTTTTAGTGCTATTACTGCTGCATCCAGCCTTGCTTCTGGATCTTTGCATATTCCATCTGAACAGCAACATATGGAAACCAATTTCAGGGCAACTTTTGCTGGAGTATCAGTTGTTTTGTCTAGCTGTGTTGATGAGCAGAATACATTTTCTGATACTGAAATTGGTCACATGGTTGGGTTACAAATTGATTATCTTGGTGCAGAGTGCAATGACATTGTTTTTGCATTGCAGGTATGCCCTCAAGGCATGACTCTTGATGCAAAGGTGAGGTATGTAGAAGTTGCTAATTTTGTGAACATTGGAATTGATGCTAAAAATCAAAATGCTCTGGTTCAACACCTACAAGCTAAGGTCCTTGATGCTCTCCCTTCGTCTGGCTCTTACAATATAGATTCACATTCATTAATTGGGCCTGTTGCGACAGATTTTCCATTTGGAAATAATGATTGTTTGTTAAAAGTTACACTGTTTAGAACTTCTGGTGTCACGAAGTGCAAATTTTCCATGCAATCAAGTTCATCTGATGGTTGTCTGATAGGAAAGACATCATTCTCACTGAACTTGCCCCCATTTATTTTTTGGGTTATCTTTTCAGTAATTAATGTGCTCATGAATCTGCTAAAGGAAGTTGAGAAATCACTTGGGATGCATAATAAAGAAAAGGTAATTCTATTGGAAGCCTCAGATAACAAGTGTGGACCGTCTCAGAGTAATACGAAGGAAGGTTCTAGTCCCTGTGTGACATCTTTCTCCACAACACAATGCTTGCATGGTGATATATCAATTTCTAATGCAAGAGTGATATTGTGTTTTCCTTTTGGAAGGGACGAAGTTTATAACAATTCATTTCCCTGGGAAGAGTTCGTTGCTCTTGATTTTACTTCATTGTCACCTTTGAACAATGATTGCACTCCAGATTATAGTCAAAGTTCAAATGCAAGTTCGAAGAAAAGATTTCCTTCAGTATCTGCTCAATCTATTCAACTGAGTTTCTGTGATCTTGACATCTACTTGATCACATCAAGTAATGAGAATGGTGGAATCATATCCTATGATGCGCAGAATGAGAAATTTTCTGCTAGCTGCTTCTTTTCTATTTTTCATAGAAGAGGATGTTTCTCTGTTTTTCGTGTTGTTTGGCAAGTGGGTAAAGTGACTGGTCCTTGGATTGCTAAGAAAGCCAGATTATTTGCTAATTCAGAGCAAAGTAGGGGCAAAGATGACACTAGAAGAAGGGGGCACGAGTTTGTGTCTGCATCAACAGTAAAAGATCTGGAAGATTGGAAATCTCAAACTCAACAAGAGATGATTTTAAGCTCATCATTTCTCATACATGTCCATCTATCTCAACTTGTGATTAATGTGAATTATTCTCAATATAAAGGCATACATCATCTTCTACATCAGATATTGAATGCATTGACATGTGTGACTTCTAAGGAAGCCAATGTTGAAAAGGAATCTTCTGTCTCACAATCATCAGTATTTTTGGAATGTGATTCTCTTGAAATTCTTATTGATAGGGATACATCTGAGAAAGCCAAAAGTTCGATCAAGAGTGAACTTCCTGGAATTTGGTGTCAATTCAGGCTGAAAGTTCAAAAGTTTGAGGTGCTGTCGGTCACCAATACTGGTGGCATTAAGGCTGCAAGTTTCTTCCGATTAGCTCATGGTGAAGGCAAGTTGTGGGGGTTTGTCACTGGACTTCCTGATCATGAGTTTCTTCTAATTACTTGTAGCAACTCCTCTGTGAAAAGAGGTGATGGAGGAGGTTCTAATGCATTATCTTCCAAATGTGCTGGTTCTGAAGTCATTTGTCTCTCTGACCCCGAGATTTCTGACACTGTAACATCCATTACGGTCAGTTGCAGTACGATTATTGCTGTAGGTGGTCGTTTGGATTGGTTTGATGCAATTTCATCCTTTTTCTGTTTGCCTGCTTCTAATACCAAAGGGGTAGGGGATACTAGTATTTCAAAGAAGGAACATAATGTGTCTTACACAACTTCTTTTGTTCTGTGCTTGATTGATACCGCTTTGAGCTATGAGCCTTATGTGAAGAATCCTGTAGTTCAGAAGGAATTGAATTCAGAGTCTAGCTGTTCACTTATTGAAGATATGAGTGAACAATGTGTTTCCTGTTTGTTGGCTGCATCCAGCTTAACTCTTTCAAATTCATCTTCAGCAGACACAGTTGGAAGTGTTTTCCAAATCCGAGTGCATGACTTGGGGCTTCTAATTCACTTAATATCAGTATTGGATTCTGTGTCTGGCATTTATAGTGTTGAACATCTTCAAAAAACTGGTTATGTTAAAGTTGCTCAGGAGGCTTTTATGGAGGCGATTTTGAAAACAAACTGTACTAGTAGTCTTCTTTGGGAACTGGAATTATCTAAATCTCACCTTAATGTGGAAACATGCTATGACACAACTGCTAGTCTGATTCGTTTGGCTGCCCAACTTCAGCAATTATTTGCTCCTGATGTGGAGGAATCTATTGTGCATTTGCAGAATAGGTGGCATAACGTTCAACAGGCACAACAAAGGAATGAATTTAAAATTGAAAATAAGAATCTCAGATTTGACTCGATGTCTACAATTTCTGAACAATGCTCCCCTCCAACATTTTCAACGGATGGATCTAGTATAGCTGGCTGGATGGATGAAATATGTGAAGATGCATTTAAAGTAAATAACAATAATGCACCCCAATCTTATCCTTTTGGATCAGGGATTCCACTTGAAGGAAGCTTAATCGAGGTTGGTCAGATGAATTTCCATAAGCCTGAAATTCTCTCTCATGAATTAATTTTGACTGAGCCAGTGAGTGTGCTAGGACCAGAAGGTAGCGATACTTCATTTCTGCAAGAGGGTTGTTTTCCAGAGGTAATAGAAAGCTATTGTTTGTCTGACTTACGCCCTCTGTCGGAGCTATCTCTAGGTATTCATTGTGATGAGCTTTCTAGACACAAACTGAGGAATGTGGAACATAAAGAGATTGAAAGAGGAAGTGGTAGATGGTATGGAGGCACCTCTCTGAAAGTATTAGAAAACCACATTGCAGAGGAAAGCAAACAACCTGGACTGGAAAAGGCTGTAGATCATCGAGGCATGCTTTCATCTGACGATAGTTCATCACATAGTGAAACTTGTGGACGAGTAATTCTTAATAAAATTGATATAAGATGGAGAATGTATGGTGGTTCTGATTGGCTTGACTCTGAGAAAAGTGGGCAGCATTCTGGGAGAGACACATCTATTTGCTTGGAACTTGCATTATCTGGGATGAAATTTCAGTATGACATATTTCCAGTTGGTGGACTACATGTATCTAAGATGCATGTGTCTGTTCAAGATTTTTATCTCTATGACAGAAGCCATGGTGCACCTTGGAAACTGGTATTAGGATATTATCACTCAAAAGGTCATCCTAGGGAATCATTTTCAAAAGCATTTAAATTGGACTTGGATGCAGTTAGACCAGATCCTCTTACTCCCCTTGAGGAGTACAGGTTAAATGTTACTATTTTACCTTTGTTGTTACATCTCCATCAATGTCAGCTTGATTTTTTTGTTGACTTCTTTGGGAGAAAAAACACATTGAAGGATCAGTTTTCTAATAGTTGTCAAGATTTCGAGGGTTCAAAATCATTGCTTGAGAAGACTAAGAAAAATAAAGATCATGTACTTCATTCAATTGCACCAGAGGCGCTGCTTCCCTACTTCCAGAAGCTAGATATATGGCCTATTCTTGTTCGGGTGGATTACAGTCCGAGTCGTGTAGATCTAGCAGCTTTAAGGCATGGAAAGTATGTAGAGCTTGTAAATCTTGTCCCGTGGAAGGGGGTCGAGCTTAACCTGAAACATGTTCATGCCTCTGGCGTCTACGGTTGGGCCAGTGTTTGTGAAATTACTGTAGGGGATTGGTTGGAAGATATATCTCAGAATCAAATTCGTAAAATACTCCGCGGGCTTCCTACTGTGCGATCATTGATTGCAGTTGGGGCTGGTGCTGCTAAGCTGGTTTCTTCACCAGTAGAGAGCTACAAGAAGGAGCGGAGAGTGCTCAAGGGTGTGCAGAGAGGTACAATTGCATTTCTTCGAAGCATTTCTCTTGAAGCTGTTGGACTTGGAGTTCATCTAGCTGCTGGAGCCCATGACATTCTCCTCCAAGCAGAATATATTCTTTCAAGCATACCTTCTCCAGTTCCACTGCCTGTGAAAGACAAATCAAAAACAGATGTTCGATCCAATCAACCTAAAGATGCCCAAGAAGGATTTCAACAGGCTTATGAGAGTCTTAGTGATGGCTTGGGAAAATCTGCTGCTGTGTTAGTTCAGAGCCCCTTAAAAAAATTTCAGCGAGGTTCAGGTGCTGGACCTGCCTTGGCTGCTGCTGTTCGAGCAGTTCCTGCTGCTGCCATAGCCCCCGCTTCAGCTTGTGCAAGTGCTGTACACTGTGCTCTTCTTGGATTCAGAAATAGCTTAGATCCAGAACGTAAAAAGGAATCCATGGAGAAATATTGTCCAACACAACCCTGGGAAGAAGACTGA 5937 0.4015 MFPWRNFAKSAEATFSRWALKRVCKFFLKKKLGQFILGDLDLDQLDVQLSKGTIQLSDLALNVDFVNTKFGKTSSIVIKEGSIGYLLIKMPWSGKGCEVEVNGLELVVSPCSDKVSTSEDVTCGMDNSDNHHHRYNSTMTEHEISDDAEKLASMDVHEGVKTIAKMIKWLLTSFHVTVKNVIVAFDPSLDNVENKTHHRHALVLQISEIQCGTSLSEDADLNVDVLGISQLTNFVKFHGAVIELLQIDNEEDFYFQHESRAGCDEPVLGSNIATCPVMTGNKGGFSGSIKLSIPWKNGSLDICKVDADACVDPIVLRFQPSSIKWLLQSWETLKNLNKDGKGCKNHNIRGSAQLNSTLLRHSSTSVSITNAPSGSITADGSLSAEYASLIQPETLAEDLLPAANLISDWVPLSADTNHNKDGIQELDFGASVDQFFECFDGMRNSQSTLGNSGMWNWTYSVFSAITAASSLASGSLHIPSEQQHMETNFRATFAGVSVVLSSCVDEQNTFSDTEIGHMVGLQIDYLGAECNDIVFALQVCPQGMTLDAKVRYVEVANFVNIGIDAKNQNALVQHLQAKVLDALPSSGSYNIDSHSLIGPVATDFPFGNNDCLLKVTLFRTSGVTKCKFSMQSSSSDGCLIGKTSFSLNLPPFIFWVIFSVINVLMNLLKEVEKSLGMHNKEKVILLEASDNKCGPSQSNTKEGSSPCVTSFSTTQCLHGDISISNARVILCFPFGRDEVYNNSFPWEEFVALDFTSLSPLNNDCTPDYSQSSNASSKKRFPSVSAQSIQLSFCDLDIYLITSSNENGGIISYDAQNEKFSASCFFSIFHRRGCFSVFRVVWQVGKVTGPWIAKKARLFANSEQSRGKDDTRRRGHEFVSASTVKDLEDWKSQTQQEMILSSSFLIHVHLSQLVINVNYSQYKGIHHLLHQILNALTCVTSKEANVEKESSVSQSSVFLECDSLEILIDRDTSEKAKSSIKSELPGIWCQFRLKVQKFEVLSVTNTGGIKAASFFRLAHGEGKLWGFVTGLPDHEFLLITCSNSSVKRGDGGGSNALSSKCAGSEVICLSDPEISDTVTSITVSCSTIIAVGGRLDWFDAISSFFCLPASNTKGVGDTSISKKEHNVSYTTSFVLCLIDTALSYEPYVKNPVVQKELNSESSCSLIEDMSEQCVSCLLAASSLTLSNSSSADTVGSVFQIRVHDLGLLIHLISVLDSVSGIYSVEHLQKTGYVKVAQEAFMEAILKTNCTSSLLWELELSKSHLNVETCYDTTASLIRLAAQLQQLFAPDVEESIVHLQNRWHNVQQAQQRNEFKIENKNLRFDSMSTISEQCSPPTFSTDGSSIAGWMDEICEDAFKVNNNNAPQSYPFGSGIPLEGSLIEVGQMNFHKPEILSHELILTEPVSVLGPEGSDTSFLQEGCFPEVIESYCLSDLRPLSELSLGIHCDELSRHKLRNVEHKEIERGSGRWYGGTSLKVLENHIAEESKQPGLEKAVDHRGMLSSDDSSSHSETCGRVILNKIDIRWRMYGGSDWLDSEKSGQHSGRDTSICLELALSGMKFQYDIFPVGGLHVSKMHVSVQDFYLYDRSHGAPWKLVLGYYHSKGHPRESFSKAFKLDLDAVRPDPLTPLEEYRLNVTILPLLLHLHQCQLDFFVDFFGRKNTLKDQFSNSCQDFEGSKSLLEKTKKNKDHVLHSIAPEALLPYFQKLDIWPILVRVDYSPSRVDLAALRHGKYVELVNLVPWKGVELNLKHVHASGVYGWASVCEITVGDWLEDISQNQIRKILRGLPTVRSLIAVGAGAAKLVSSPVESYKKERRVLKGVQRGTIAFLRSISLEAVGLGVHLAAGAHDILLQAEYILSSIPSPVPLPVKDKSKTDVRSNQPKDAQEGFQQAYESLSDGLGKSAAVLVQSPLKKFQRGSGAGPALAAAVRAVPAAAIAPASACASAVHCALLGFRNSLDPERKKESMEKYCPTQPWEED 1978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g00023 1978 Pfam Autophagy-related protein C terminal domain 1876 1969 IPR015412 -
Phco8g00023 1978 Pfam Autophagy-related protein 2 CAD motif 1218 1289 IPR026885 -
Phco8g00023 1978 Pfam N-terminal region of Chorein or VPS13 20 119 IPR026854 -
Phco8g00023 1978 PANTHER AUTOPHAGY-RELATED 2, ISOFORM A 1 1969 IPR026849 GO:0006914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00023 8 243826 261555 Phco8g00023 8 243826 261555 ECH