Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02961 ATGTCAGCTTCCAGAATGGACAGAGCCTCCAGTGTGAGGGAGAGGGTGCAAGACACATTCTCTAAGTACCGGAATGAGTTGATCTCTCTTCTCTCTAGGTATGTTGCTGGGGGCAAAGGATTACTACAACCACATGACCTACTGGATCAAGTAGAAAAGATTCTTCAAGAGGATGAAGGGATGCAGAAACTCAAAGAAAGTTCCTTTGTTAAAGAGCTAGAATCTGCACAGGAAGCCATAGTTCTACCACCTTTTGTGTCTATAGCTTTGCGTCCAAGATGTGGTGTTTGGGAGTATTTTCGTGTTAATGCATTTGAACTCAGTGTGGATAGTCTGAATGTTGCAGAATATCTCCGATTCAAAGAAGAACTAGTAGATGGAGAATGCAATGACAAGTATATGCTTGAACTAGACTTTGAGCCATTTAATGCAACATTCCCTAGACCAACTCGATCATCCTCTATTGGTAATGGTGTTCAATTTCTCAACCGTCATCTTTCATCATTCATGTTTCGTAACAAAGAAAGTTTGGATCCTCTCCTCGCATTTCTACGCACACACAAATATGATGGTCATGCAATGATGGTAAATGACCGGATTCATAACATATCCAAGCTCCAGTCTTCCATGGCAAGGGCAGAAGAAATACTTTCTAATCTCCCACCCAACACACCATATTCTGACTTTGAATATGAACTGCAAGGATTGGGATTGGAGAGAGGTTGGGGTGATACAGCCGAGAGGGTGCTAGAAATGGTGCATCTTCTACTAGATATCCTTCAAGCTCCTGATCCAAACACCTTAGAGTCATTTCTGGGAAGAATTCCAATGGTATTCAATGTTGTGATTGTATCACCAGCTGGTTACTTTGGCCAAGTAAATATCCTGGGTTTGCCAGATACTGGTGGACAGATTGTTTATATACTTGATCAAGTGCGTGCTCTAGAGAAGGAGATGCTGGTCAGAATTCAAAAACAAGGACTTGATGTGTCTCCAAAAATTCTGATAGTTACTAGATTGATACCAGAGGCAAAAGGGACAACTTGCAATCAGAGACTAGAAAGAGTTAGTGGAACTGAGAATTCATATATACTGAGAGTACCTTTTAAAACTAAGAATGGAATTTTGAGAAAATGGATTTCAAGATTTGACATGTGGCCTTATCTAGAGACATTTGCAGAGGATGCATCACACGAAATTGCAGCTGAGTTACAAGGAATTCCAGATCTGATAATAGGCAACTACAGTCATGGAAATCTTGTTGCAACCTTGTTATCTTATAAGCTAGGAATCACACAGTGCAATATAGCCCATTCATTGGAGAAGACTAAGCATCCCGGCTCTGATATATATTGGAAAAAATATGAAGACAAGTACCATTTTACTTGTCAATTCACAGCTGACCTTATTGCAATGAACAATGCAGATTTTATAATCACTAGTACATACCAAGAAATTGCAGGAAGCAAGAATAATGTTGGACAATATGAGAGCCACACTGCCTTCACTCTTCCAGGACTCTATCGTGTTGTTCATGGCATTGATGTTTTTGATCCCAAGTTTAATATCGTGTCTCCTGGTGCAGACATGCGCATATATTTTCCATTCTCAGACAGAGAAAAGAGGCTAACTTCTCTCCATGGCTCGATTCAAAAACTTATATATGGTGATGAACAGAATGAAGAACATGTTGGCTTGATAAATGATAGAGCAAAGCCAATTATCTTTTCTATGGCAAAACTTGATCAAGTGAAAAATATAAGCGGGCTTGTTGAATGCTTTGGTAAAAGCTCAAAGTTGAGAGAGCTTGTGAATCTTGTGGTAGTTGGTGGCAACATTGACGTACAAAAGTCTAGGGACACAGAAGAAATGCAGGAGATAAAGAAAATGCATAGCCTCATAGAAAAATATAACTTAAACGGCCAATTCCGGTGGATAAAGGCCCAAGTGAACCGTGCTCGTAATGGAGAGCTCTACCGTTGTATTGCTGATGTGAAAGGTGCTTTTGTGCAGCCAGCTTTCTATGAAGGGTTTGGCCTAACAATTGTGGAAGCAATGACTTGTGGGCTTCCTACATTTGCTACTTGTCATGGTGGTCCTGCTGAGATAATTGAGCATGGAGTTTCTGGATTCCATATTGAGCCACATCACCCTGATGAAGTTGCTGCAAATTTAATAAAGTTTTTTGAGGAATGCCAGCATGATCCTGGCTACTGGAACAAGATTTCTGATGCAGCTCTGAACCGGATTCATGAGAGGTATACATGGAAGATATACTCTGAGAGGCTTCTCACTTTAGCTGGTGTCTATGGCTTCTGGAAGCATGTGTCTAAGCTTGAGAGGAGAGAAACTAGGCGATACTTGGAGATGTTCTACATTCTCAAGTTCCGGGATTTGGTACAAGGAATTCCAATGGCAATCGAGGATTCGGATATGGCGAGGAAGACATCAGACCTCTTAGAGCAACTCGATGTTGTTCATCACTTTTCCTACGACTCTCTCATCCGGTACTGCTCTTCCAATGTTTCCGGCTTCCCTCAATCCCCTACTCGGTTCACCGTTTCGCAGTTTGGGCATGGACAATCCAACCCCACGTACTTGTTGGAGGTGGGCTCTCATGACTCCGTCGTGAATCGCTATGTTCTCAGGAAGAAACCTGCCGGGAAATTGCTCGCTTCAGCTCATGCCGTTGATAGAGAATTTCAGGTTCTCCAGGCATTGGGTGCTCATACCAAAGTTCCTGTTCCTAAGGTTTTCTGTATGTGCAATGATCCTAGTGTTATTGGAACCGCGTTTTATATCATGGAATATTTGGAGGGGCGCATATTTATTGACTCCAAGTTACCGGGTGTGGCACCTCAGAGGAGGAGCGCAATTTACAGGGCAACTGCTAAAGCCTTAGCTTCCATACATTCTGCTAATGTGGACTCCATTGGTCTGGGAAAATACGGAAAACGCAATAATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTTCCTCAAGTAAACCTGCTAGTAATCCAAAAATGTTTGCCTTGATTGATTGGCTACGACATCAAATCCCTTCTGAAGATTATTCAGGAGCAACAGGAGGTCTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTTGACTGGGAATTGTCTACCCTTGGAAACCAAATGTGTGATGTTGCATATAGCTGTATGACTTATGTTGCAGATATTGGGCCCGAAAACGTGCGCGAAGGTATGGAACATTCTGGACTACCTGATGGTATTCCTTCACTACCAGAATATTTGGCCGATTACTGTTCTCTAGCAGAAAGGAAATGGCCTGTTGCTGAATGGAAGTTCTATATTGCCTTTTCTTTGTTCCGGGGGGCTTCAATTTATGCTGGAGTTTATAATAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCGACACACTGGAGTACTTGCTAATGGCCTTATAGATGCTGCTTGGGAATTTATTGAACAAAATTCTGTGCATCCTCAGCATCCTCCCTCAGTACGATACTATTCGAAAGAGTTTGTGAATGGGAATGATGCACAGGGCCGCTCAGATCAGGGGAAGTTTGTTCCTAGTCAAAAGGTTTTGGCACTGAGGAAAAAATTAATTAAGTTCATGGAGGAACATATTTACCCTATGGAAAATGAATTTTATAAACTTGCCCAATCAGACTCACGCTGGACTGTTCACCCAGCAGAGGAAAAGTTAAAGGAGATGGCAAAAAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCAGTGAGAGCAAGAAACCTTATCTTCAATGGGAGCAATAATCATCTCTCTACCGATGCAAATGACTTGTTATTGGGAGCTGGTCTCACCAATCTCGAATATGGATACCTTTGTGAGATCATGGGTCGTTCTATTTGGGCTCCACAAATATTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTGCGTTATGGAAATAAGGAACAACTACAAGAATGGCTAGTTCCTTTGCTTGAGGGGACTATTAGGTCTGGATTTGCTATGACAGAACCACAAGTTGCATCTTCCGATGCAACCAATATTGAGTGCTCTATTAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACTAGTGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGGAAAACTGACTTCAACGCAGCGAAGCATAAACAGCAATCTATGATCTTAGTGGATGTCCAGACTCCTGGTGTTCACATAAAGAGACCATTGACGGTGTTTGGCTATGATGATGCTCCACATGGGCATGCAGAAATAACATTTGAAAATGTTTGTGTGCCAGCAAAAAACATCATACTGGGTGAAGGACGTGGATTTGAGATTGCTCAAGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGTTGCTGAGCGAGGCATGCAGTTGATGGTTCAAAGAGCCATCAGTAGAAAAACATTTGGGAAGTTCATTGCTCAACATGGTTCATTTCTTTCAGATATGGCCAAGTGCCGAATAGAGCTAGAGAGGACCAGATTGTTAGTGTTGGAAGCCGCTGATCAACTTGATAGGCATGGGAACAAAAAAGCTCGGGGGATACTAGCAATGGCAAAGGTAGCTGCACCGAATATGGCACTGAAGGTGCTTGACATGGCAATGCAAGTGCATGGAGCAGCTGGTGTTTCATCTGAAACCGTCCTGGCTCATCTCTGGGCTGCTTCGAGGACACTGAGACTTGCAGATGGTCCAGATGAAGTTCACTTGGGGACCATTGCCAAGTTAGAACTGCAGAAAGCCAAGCTTTGA 4902 0.4247 MSASRMDRASSVRERVQDTFSKYRNELISLLSRYVAGGKGLLQPHDLLDQVEKILQEDEGMQKLKESSFVKELESAQEAIVLPPFVSIALRPRCGVWEYFRVNAFELSVDSLNVAEYLRFKEELVDGECNDKYMLELDFEPFNATFPRPTRSSSIGNGVQFLNRHLSSFMFRNKESLDPLLAFLRTHKYDGHAMMVNDRIHNISKLQSSMARAEEILSNLPPNTPYSDFEYELQGLGLERGWGDTAERVLEMVHLLLDILQAPDPNTLESFLGRIPMVFNVVIVSPAGYFGQVNILGLPDTGGQIVYILDQVRALEKEMLVRIQKQGLDVSPKILIVTRLIPEAKGTTCNQRLERVSGTENSYILRVPFKTKNGILRKWISRFDMWPYLETFAEDASHEIAAELQGIPDLIIGNYSHGNLVATLLSYKLGITQCNIAHSLEKTKHPGSDIYWKKYEDKYHFTCQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMRIYFPFSDREKRLTSLHGSIQKLIYGDEQNEEHVGLINDRAKPIIFSMAKLDQVKNISGLVECFGKSSKLRELVNLVVVGGNIDVQKSRDTEEMQEIKKMHSLIEKYNLNGQFRWIKAQVNRARNGELYRCIADVKGAFVQPAFYEGFGLTIVEAMTCGLPTFATCHGGPAEIIEHGVSGFHIEPHHPDEVAANLIKFFEECQHDPGYWNKISDAALNRIHERYTWKIYSERLLTLAGVYGFWKHVSKLERRETRRYLEMFYILKFRDLVQGIPMAIEDSDMARKTSDLLEQLDVVHHFSYDSLIRYCSSNVSGFPQSPTRFTVSQFGHGQSNPTYLLEVGSHDSVVNRYVLRKKPAGKLLASAHAVDREFQVLQALGAHTKVPVPKVFCMCNDPSVIGTAFYIMEYLEGRIFIDSKLPGVAPQRRSAIYRATAKALASIHSANVDSIGLGKYGKRNNYCKRQIERWAKQYVSSSKPASNPKMFALIDWLRHQIPSEDYSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMTYVADIGPENVREGMEHSGLPDGIPSLPEYLADYCSLAERKWPVAEWKFYIAFSLFRGASIYAGVYNRWVKGNASGGERARHTGVLANGLIDAAWEFIEQNSVHPQHPPSVRYYSKEFVNGNDAQGRSDQGKFVPSQKVLALRKKLIKFMEEHIYPMENEFYKLAQSDSRWTVHPAEEKLKEMAKKEGLWNLWIPLDSAVRARNLIFNGSNNHLSTDANDLLLGAGLTNLEYGYLCEIMGRSIWAPQIFNCGAPDTGNMEVLLRYGNKEQLQEWLVPLLEGTIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVQTPGVHIKRPLTVFGYDDAPHGHAEITFENVCVPAKNIILGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMQLMVQRAISRKTFGKFIAQHGSFLSDMAKCRIELERTRLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSETVLAHLWAASRTLRLADGPDEVHLGTIAKLELQKAKL 1633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02961 1633 Gene3D - 148 277 - -
Phco7g02961 1633 Gene3D - 1363 1477 IPR046373 GO:0016627
Phco7g02961 1633 NCBIfam sucrose synthase 24 805 IPR012820 GO:0005985|GO:0016157
Phco7g02961 1633 Gene3D - 25 147 - -
Phco7g02961 1633 Gene3D - 1478 1632 - -
Phco7g02961 1633 SUPERFAMILY Protein kinase-like (PK-like) 852 1151 IPR011009 -
Phco7g02961 1633 FunFam Sucrose synthase 11 147 - -
Phco7g02961 1633 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 1475 1629 IPR036250 GO:0016627
Phco7g02961 1633 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 297 766 - -
Phco7g02961 1633 Gene3D Glycogen Phosphorylase B; 529 756 - -
Phco7g02961 1633 Pfam Phosphotransferase enzyme family 854 1097 IPR002575 -
Phco7g02961 1633 PANTHER - 7 808 IPR012820 GO:0005985|GO:0016157
Phco7g02961 1633 Pfam Glycosyl transferases group 1 561 733 IPR001296 GO:0016757
Phco7g02961 1633 FunFam Acyl-CoA dehydrogenase fadE12 1363 1481 - -
Phco7g02961 1633 Pfam Acyl-CoA dehydrogenase, middle domain 1364 1465 IPR006091 GO:0016627
Phco7g02961 1633 Pfam Acyl-CoA dehydrogenase, N-terminal domain 1219 1359 IPR013786 GO:0016627|GO:0050660
Phco7g02961 1633 Gene3D - 940 1180 - -
Phco7g02961 1633 Pfam Acyl-CoA dehydrogenase, C-terminal domain 1477 1625 IPR009075 GO:0016627
Phco7g02961 1633 Gene3D Phosphorylase Kinase; domain 1 831 939 - -
Phco7g02961 1633 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 1211 1490 IPR009100 GO:0016627
Phco7g02961 1633 Gene3D Glycogen Phosphorylase B; 282 799 - -
Phco7g02961 1633 FunFam Sucrose synthase 529 756 - -
Phco7g02961 1633 Gene3D - 1212 1361 IPR037069 GO:0016627|GO:0050660
Phco7g02961 1633 Pfam Sucrose synthase 8 555 IPR000368 GO:0005985|GO:0016157
Phco7g02961 1633 FunFam Sucrose synthase 148 277 - -
Phco7g02961 1633 CDD ACAD10_11_N-like 853 1116 IPR041726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02961 Phco-Chr7 48408670 48423778 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02961 7 48408670 48423778 Phco7g02961 7 48408670 48423778 ECH