Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02955 ATGGAGAATCTAGCACGCAAACTCATTGTCATTTCACTCTGCGCTCTCTCTTTTTTCTCAGTTTATTGTTCTCAATATCTAACTTCAGATAGATCACCAGTTCCCCTGTTTGCTTTTAGTTGGTGGGATGACAAGGGCACGTTCCATGCCGGTGACATAGCAACCATCAAAGTCAAAGTGCTTGAGAATGCTGATAAGATTGACAAAAAAGTTTTCAACCCCACACTAACTGTGAATGGAAAGGAAGGGAACAGTTCCTACGTGTCTACTTTGTTGTCAGATTTCGAAGGAGACCCAAATGAATGGAAGATTTCCTTCACCCCCATCAGGGTTGGACTGTTTAATGTACTCATCAGTGAGGACCGTTATAAAGTTGATGATTCATCTTTGCATTTCCAAGTTGAACCAGGGAACATGTACCCGTCAGTGTGCGTTGCATCATGGAAGGGCGTGAGACATGAGTACGAAGCTGGTTCAAAAGCTACGATTATGGTGCTCCTTAAAGATGCATTTGGGAACGGTATCTCTAAGACGACTGAAGTGTCCTATTTGCCTGATTTTAAGTTGTCTGTGTTGCATGAAAATGGTTCTGTTGCAAGTTCTCCAGATATCTTTAACATGGGGTGGACTGAGTTTGATTATATAGTCATTGAGTTTATTGTGACAAAAGCTGGAAAGTTCTCATTGATCTTAGAAGGAGGAAATCAAACCTTGAATGGTTCTCCATTACCATTGAAGGTGAATCCAGGAGCTATAGATGTCTCTAACTGTATTGCCAAATGGAACATTGAATCTCATGCATGGCAATTGTCTTCCAAGATGGAAATCTTTATACATCAGTTAGATCAATACGGAAATCTGGTTTCTGGGCTGTATCCTTTTGATTCTGAAGTTGTTGAAACTGACACAAACTTGTCGATACCGATATCAGATCTCCACTTTGAAGAAGTGGATGCTGGAATTCAGTTGTTTTCGTTTAGCAATTTTGAGCCAGGCAACTTCTTATTGACAATATATGATTCCAAGCATAATAAAAGCATTTCCAATATGCCATATGTTTATACTGTTTTTATAGGTTACTGTGATGGGGTTAAAAGTGTTGTTAATGGATCTGGTTTAAATGATTCAGTAGCTGGTGTAAAGGAAGAATTCTCTGTGTATTTGAATGACATATATCAATATCCTTCCCCTGTTGAAGCAAACATACTTCAAGTACAAATTTTAAGACAAAATGACTCGTATAGAGTTATGCCAGTCATCTATACTGTGCTTAACAGTAATGGTAGCAGAATAGCTTCAGGAGTGAGATATGACGGTATTGGTCACATGGAAACTGTTCCATCACCTTCAATAGAGTTGAGCAACAATTCTAATGGGAGCAGAAGCTTTATCATGGCAAGTGATTTTCATGTGGATTACATACCAGAAAAAAGTGGATTTTATGATATTAATGTATACTGTGGAAACATATTATTGAATGAGGGACATTCTTTCCGAAAAGAGGTAAAAGCAGGCGAAGTAAATGTTTCCTTGTCAAGTGTTGTGAGGTTTTCTCCAAAGGTGCCAAAGCTGTCCAAAAATGAAATAATTGTCCAGCTTGTGGATTCATATTTAAACCCTGTCCTCTCGCAACAATCAAGGTTGAAATTGGAGATTGCTTCTGCTAATAGTTCTTGCTTTTCAACTTTGGATATCACAGACAATAAGGATGGATCATACAGCTGCAGCTACATGGCCAAAGATGTTGGCACTTACGAGATTTGTGCTTCCTTTGATGGCAACCATTTCTTATCATGTCCCTTCAGTATCAATGTGTACAGCAGTGAATATTTTCCAAAAGCTAACAATGATACAATATCTATTTGGGAGGACCAATCTGTTGCCTATGATGTCTTAGCAAATGATTATTTTGCGGGTGATAATGCAAGTATAGTTGAATTCTCAAAATCAGATCATGGTTCACTTATACAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAATGATTCCTTTTGGTATACTATTTCTGATATAAATGGAAATCTTGCTTCTGCTTCCGTGTACATATCTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGCTCCAAATCAACTGCAAGCAACAGAAGATTTAATAAGTCCTAGATTTGGTGGTTTCACCGGGTTTGAGATAACTTATTCGAATCCAATGGAAAATATTTCTGTCAACCTTAGTGCACAATCTGGAATTATACTTCTGTCTCCTATGGCTATGCAATTTGGGCAAGTAATGTGGAGTGAACTTACAGTTGACAATGGAAATGAAACAGCAACCAGTTTGATAATAGAAGGCTCTGTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAGTATCTGGGAAATGAAAATTTTTATGGTGGAGATACCATTCAAGTCTCAACCAGGAATAATAACGGAGTAAATTCACTTGGTGTTCCAATTTTTGTTGATCCTATCAATGACCCTCCATTTATTAGAGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGACAAGTTTGACTTTTTCATTGGAGATCCCGATCTTCTTTCCTTCCCTGGTGGTCAGGCTAATTTTTTTGTGACGTTCTCTATGGAAGTAAATGATGGATGGTTAGTGACAAACCTACCAGTTCATTTGATCAATACAACTGAATTGAAGCACAGAATTAATTGTCAGTGGCAGCCTCTTCAGACATATGTTACAATCTCAGAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGGCACAGTCAATGACTGCAATAATGTTATGCAGCAACTATTCTATCATGGAGGTGAGCTTGGAGCTGTTTTAACATTGACATTAAATGACATGGGAAACTATGGATGTTATCCAGATTGTGCAGACGGCATGTCAATGCCATTATACACTGAAACTACAGTTAATTTAATGAGAAAACAGCCAATGAGTTCATTTCTGGCTCACACCTTAGGATCAATCATTGTCATTGAATTTGTTATCATGTTCTCTCTTGGAGCCTTGCTTCTGTACTTCACCTGTAAATGTGCAGTTCTTCTTGCTCATGAAAGAAGAAACAGAGAAGAAAGGTCTTCAGAGTTATCTAATTCCCAGAGTTTCCCCAGAGAAACTTGTTTTCCATGCCCCATTGACAATGAAATAATAGGAGCCTTCAAAAATAACAATCCACTTTTCCCTCTAACTTTGACAGCCTTTACGAAACGTTGCCGTTTGGACCCCACAACCCCAATTCCCAAAGCCACGACCCTAGGGTTTAGATGGGGTCCAACTTAA 3345 0.3845 MENLARKLIVISLCALSFFSVYCSQYLTSDRSPVPLFAFSWWDDKGTFHAGDIATIKVKVLENADKIDKKVFNPTLTVNGKEGNSSYVSTLLSDFEGDPNEWKISFTPIRVGLFNVLISEDRYKVDDSSLHFQVEPGNMYPSVCVASWKGVRHEYEAGSKATIMVLLKDAFGNGISKTTEVSYLPDFKLSVLHENGSVASSPDIFNMGWTEFDYIVIEFIVTKAGKFSLILEGGNQTLNGSPLPLKVNPGAIDVSNCIAKWNIESHAWQLSSKMEIFIHQLDQYGNLVSGLYPFDSEVVETDTNLSIPISDLHFEEVDAGIQLFSFSNFEPGNFLLTIYDSKHNKSISNMPYVYTVFIGYCDGVKSVVNGSGLNDSVAGVKEEFSVYLNDIYQYPSPVEANILQVQILRQNDSYRVMPVIYTVLNSNGSRIASGVRYDGIGHMETVPSPSIELSNNSNGSRSFIMASDFHVDYIPEKSGFYDINVYCGNILLNEGHSFRKEVKAGEVNVSLSSVVRFSPKVPKLSKNEIIVQLVDSYLNPVLSQQSRLKLEIASANSSCFSTLDITDNKDGSYSCSYMAKDVGTYEICASFDGNHFLSCPFSINVYSSEYFPKANNDTISIWEDQSVAYDVLANDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLASASVYISVLNVPPQFVSAPNQLQATEDLISPRFGGFTGFEITYSNPMENISVNLSAQSGIILLSPMAMQFGQVMWSELTVDNGNETATSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSTRNNNGVNSLGVPIFVDPINDPPFIRAPYFIILRSNEDETLIFDQEKDKFDFFIGDPDLLSFPGGQANFFVTFSMEVNDGWLVTNLPVHLINTTELKHRINCQWQPLQTYVTISEHFMVKAHGIRFQGTVNDCNNVMQQLFYHGGELGAVLTLTLNDMGNYGCYPDCADGMSMPLYTETTVNLMRKQPMSSFLAHTLGSIIVIEFVIMFSLGALLLYFTCKCAVLLAHERRNREERSSELSNSQSFPRETCFPCPIDNEIIGAFKNNNPLFPLTLTAFTKRCRLDPTTPIPKATTLGFRWGPT 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02955 1114 Pfam Filamin/ABP280 repeat 360 489 IPR017868 -
Phco7g02955 1114 Pfam Filamin/ABP280 repeat 525 601 IPR017868 -
Phco7g02955 1114 Gene3D Immunoglobulins 508 607 IPR013783 -
Phco7g02955 1114 Gene3D Immunoglobulins 137 256 IPR013783 -
Phco7g02955 1114 SUPERFAMILY E set domains 527 608 IPR014756 -
Phco7g02955 1114 PANTHER JITTERBUG, ISOFORM N 760 1053 IPR044801 GO:0030036|GO:0051015
Phco7g02955 1114 SUPERFAMILY E set domains 140 257 IPR014756 -
Phco7g02955 1114 SMART flmn_3 508 608 IPR001298 GO:0005515
Phco7g02955 1114 ProSiteProfiles Filamin/ABP280 repeat profile. 534 605 IPR017868 -
Phco7g02955 1114 Gene3D Immunoglobulins 353 507 IPR013783 -
Phco7g02955 1114 Gene3D - 608 693 - -
Phco7g02955 1114 ProSiteProfiles Filamin/ABP280 repeat profile. 358 502 IPR017868 -
Phco7g02955 1114 Pfam Bacterial Ig domain 602 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02955 Phco-Chr7 48383754 48392433 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02955 7 48383754 48392433 Phco7g02955 7 48383754 48392433 ECH