Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02930 ATGCTGGAGCGGTGCCTGGGGACGCGGCGCGTGCGGCAGATTCAGCGCGCGTGCCGGCACAGTACGGTCACTTTCCTCTGCCTCTTCCTCACGTTGATCGTCCTCCGCGGCTCAATCGGCGCTGGAAAGTTCGGTACGCCGGAGCAGGACTTCGACGAGATCCGCTACCACATCTCTGCCGCCCGCGCCCGCCGTGTCCTCGAAGAAACCAAACCCGACGCCGGTTCCAACGCCGGTTCAAACGCCGATTCCAACCCTAACAACTACGCCACCTTCGATCTCTCTAAGATCCTCGTGGACGAGCCTCCCAGCGAGGACGAAAAGCGTGACCCCAACGCGCCCTACACTCTGGGACCCAAAATCTCCGATTGGGATGAACAGCGCCGAACCTGGCTCCGAGCCAACCCTGAGTACCCTAACTTCATCCGACCCAACAAGCCACGTGTACTTTTAGTCACCGGTTCGTCCCCCAAACCGTGTGAAAACCCAGTCGGTGATCACTACCTTGTGAAATCGATCAAGAACAAGATTGACTATTGCAGGGTTCATGGGATTGAGATTTTCTACAACATGGCTCTTTTGGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCCTTGATTCGGAAACTTTTACTCTCTCACCCTGAAGTGGAGTTTCTCTGGTGGATGGACAGTGACGCAATGTTCACCGACATGGCTTTTGAGGTTCCGTGGGAGAGGTACAAAGATTCCAACTTTGTTATGCATGGGTGGAATGAGATGGTGTATGATGAGAAAAATTGGATTGGGTTGAACACTGGGAGTTTTCTGTTGAGGAATTGTCAATGGTCTTTGGATATTCTTGATGCTTGGGCTCCTATGGGGCCTAAAGGGAAGATAAGGGATGACGCTGGGAAAGTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGACGATCAATCTGCTATGGTTTATTTGTTGGCCACTGGGAGGGAAACATGGGGTGACAAGGTTTACCTTGAGAATCATTATTACTTGCACGGGTATTGGGGGATTTTGGTGGACCGTTACGAGGAGATGATTGAGAATTATCATCCGGGGCTTGGGGATCATAGGTGGCCTTTGGTGACCCACTTTGTGGGGTGCAAGCCTTGTGGGAAGTTTGGTGATTACCCTGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTATAATTTTGGGGATAACCAGATTTTGCAGATGTATGGCTTCACTCACAAGACCCTTGCTAGTCGCAGGGTGAAAAAAGTGAGGAATGATACTGGAAACCCTCTTGAGATCAAGGATGATCTTGGATTGCTTCACCCTGCTTTCAAAGCTATCAAGCTTCCTTCTTCTTGA 1371 0.512 MLERCLGTRRVRQIQRACRHSTVTFLCLFLTLIVLRGSIGAGKFGTPEQDFDEIRYHISAARARRVLEETKPDAGSNAGSNADSNPNNYATFDLSKILVDEPPSEDEKRDPNAPYTLGPKISDWDEQRRTWLRANPEYPNFIRPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDDAGKVLTRELKNRPVFEADDQSAMVYLLATGRETWGDKVYLENHYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHKTLASRRVKKVRNDTGNPLEIKDDLGLLHPAFKAIKLPSS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02930 456 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 440 IPR008630 GO:0016020|GO:0016757
Phco7g02930 456 FunFam xyloglucan 6-xylosyltransferase 2 145 296 - -
Phco7g02930 456 MobiDBLite consensus disorder prediction 101 121 - -
Phco7g02930 456 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 145 294 IPR029044 -
Phco7g02930 456 Pfam galactosyl transferase GMA12/MNN10 family 146 385 IPR008630 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02930 Phco-Chr7 48190846 48192216 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02930 7 48190846 48192216 Phco7g02930 7 48190846 48192216 ECH