Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02927 ATGCAGAACGAGGAAGGACAGATCACTGAGCTTTACATCCCTAGGAAGTGTTCTGCTACAAACAGATTGATCACTGCCAAAGATCATGCTTCGGTTCAGATTAACATTGGGCATGTGGATGAGAATGGTATCTACAATGGTCAATTCTCCACCTTTGCCCTTTGTGGCTACATCCGCGCTCAGGGTGATGCTGACAGTGCCCTAGATCGCCTGTGGCAGAAGAAGAAAGCTGAAGCTAAGCAACAGTAG 249 0.4739 MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGIYNGQFSTFALCGYIRAQGDADSALDRLWQKKKAEAKQQ 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02927 82 PANTHER 40S RIBOSOMAL PROTEIN S21 1 81 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phco7g02927 82 Pfam Ribosomal protein S21e 1 77 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phco7g02927 82 PIRSF RPS21e 1 82 IPR001931 GO:0003735|GO:0005840|GO:0006412
Phco7g02927 82 FunFam 40S ribosomal protein S21 1 81 - -
Phco7g02927 82 ProSitePatterns Ribosomal protein S21e signature. 11 19 IPR018279 GO:0003735|GO:0005840|GO:0006412
Phco7g02927 82 Gene3D - 1 81 IPR038579 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02927 Phco-Chr7 48182412 48183484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02927 7 48182412 48183484 Phco7g02927 7 48182412 48183484 ECH