Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02918 ATGAAAAATAACCTCCATGGTTCCTTTTTTTCCCTCTTTTTATTATTAATAATAGTCTTAGTTGTCGTGTTTGTGTCGGAGACTCTGCTAAATTCCTGCAACGCCTCAGATAGAGGCGGAGAAGTCGCCGCCATAAAAAATCTTCCAACTCAAAAAAGGCGGCAACCAACGAATTTCCCTTCTCTTTCCTGTCTCCGATGTCCGCTCCCTTCTCCATTGCCTCCTTCCCCTTCATCTCTCGTCGGTACGCTCCTTCTCTCTCTCTCTCTTCTCCTTGCTCTTTCCAAATTCAAGGGAAATTCTGACTTGGGATTGGAGGGTTTTCTTGCAATGGAGGGGGAACCCAGCCAGCTCAAACGGGCTGCGATTGATGCCTCCGCTGGAGCTCTTTCCGGTGCTGTATCCAGGACCGTCACGTCGCCTCTTGATGTTATTAAGATTAGGTTTCAGGTTCAACTAGAACCCACATCTTCATGGAATTCACTACGCAAGGATTTTACTACTCCTTCAAAATATACCGGCATGGTTCAAGCAAGCAAAGATATTTTCAGAGAAGAAGGCATGCGGGGTTTTTGGCGGGGGAATGTGCCAGCTTTGCTCATGGTTATGCCATATTCAAGTATACAATTTACTGTTCTACACATGTTGAAGTCTTTTGCTTCTGGTTCTTCCAAAACAGAGAATCACATGAATTTGAGCCCTTATCTATCCTATATGAGTGGGGCAATAGCTGGGAGTGCTGCTACTCTAGGTTCATATCCCTTTGATCTTCTCCGAACCATATTAGCTTCCCAGGGTGAACCAAAGGTTTATCCAAATATGAGAACAGCATTTGTCGATATTGTCCAGACTCGTGGCTTCCCAGGCTTGTATGCTGGATTGTCACCAACCCTAGTTGAGATCATACCATATGCAGCTCTACAATTTGGCACCTATGATACATTTAAACGTTGGACCATGGCGTGGAATCATCGTCAATATTCAAATCCTACTGCAGAAAGCATTTCTAGCATTCAGCTTTTCCTGTGTGGAGTGGGTGCAGGAACATCTGCCAAGCTCGCCACTCATCCACTTGATGTGGTCAAGAAAAGATTTCAGATTGAAGGTCTGCAAAGGCATCCAAGATATGGAGCTCGGGTTGAACACCGTGCATACAACAATATGTTTGATGCCATAAAGCGAATATTACAAAAGGAGGGTTGGGCTGGTCTATATAAAGGGATAGTCCCATCAACTGTTAAAGCTGCACCAGCTAATGCTGTAACATTTGTAGCCTATGAATTGACATCAGATTGGCTGGAATCTCTTTTGACTTGA 1317 0.4434 MKNNLHGSFFSLFLLLIIVLVVVFVSETLLNSCNASDRGGEVAAIKNLPTQKRRQPTNFPSLSCLRCPLPSPLPPSPSSLVGTLLLSLSLLLALSKFKGNSDLGLEGFLAMEGEPSQLKRAAIDASAGALSGAVSRTVTSPLDVIKIRFQVQLEPTSSWNSLRKDFTTPSKYTGMVQASKDIFREEGMRGFWRGNVPALLMVMPYSSIQFTVLHMLKSFASGSSKTENHMNLSPYLSYMSGAIAGSAATLGSYPFDLLRTILASQGEPKVYPNMRTAFVDIVQTRGFPGLYAGLSPTLVEIIPYAALQFGTYDTFKRWTMAWNHRQYSNPTAESISSIQLFLCGVGAGTSAKLATHPLDVVKKRFQIEGLQRHPRYGARVEHRAYNNMFDAIKRILQKEGWAGLYKGIVPSTVKAAPANAVTFVAYELTSDWLESLLT 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02918 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 219 IPR018108 -
Phco7g02918 438 Gene3D Mitochondrial carrier domain 116 435 IPR023395 -
Phco7g02918 438 PANTHER SOLUTE CARRIER FAMILY 25 121 433 - -
Phco7g02918 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 318 IPR018108 -
Phco7g02918 438 FunFam Mitochondrial thiamine pyrophosphate carrier 1 115 435 - -
Phco7g02918 438 SUPERFAMILY Mitochondrial carrier 120 427 IPR023395 -
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 137 151 IPR002067 GO:0055085
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 344 366 IPR002067 GO:0055085
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 124 137 IPR002067 GO:0055085
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 247 265 IPR002067 GO:0055085
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 291 309 IPR002067 GO:0055085
Phco7g02918 438 PRINTS Mitochondrial carrier protein signature 194 214 IPR002067 GO:0055085
Phco7g02918 438 ProSiteProfiles Solute carrier (Solcar) repeat profile. 335 432 IPR018108 -
Phco7g02918 438 Pfam Mitochondrial carrier protein 335 433 IPR018108 -
Phco7g02918 438 Pfam Mitochondrial carrier protein 233 319 IPR018108 -
Phco7g02918 438 Pfam Mitochondrial carrier protein 124 220 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02918 Phco-Chr7 48124243 48129504 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02918 7 48124243 48129504 Phco7g02918 7 48124243 48129504 ECH