Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02772 ATGGCGACGGAGCAGACCAAATTCAGCGTCTTGTGCAGCCTCTTCAAGTGGACGCAGCAGACCAAGTCGGCGGCGAGAAAACGCTCCAAATTCCGCAAGTTCCTCGACGCCTACTGCATTGACCGCAACTTCTTCCCTGCCATTCGCCTCATTCTTCCTAACCTCGATCGCGAGCGCGGCTCCTACGGCCTCAAGGAGTCCATCCTCGCCACCTCCCTCATCGACGCCCTCGGCATCTCCCGCGACTCCCCCGATGCCCTACGACTTGTCAATTGGCGCAAGGGCGGCGCTGCCACCGGCGCCACAGCTGGAAATTTTGCCCTCGTCGCCGCCGAGGTGCTGCACCTCAGGCAAGGGACCGCTTCGGGTGGGTTGACGATAAGGGAGTTGAATGAGTTGCTTGACCGGTTGGCTTCCGGCGAAAACAGGGCTGAGAAAATTTTGGTTCTTTCTACCCTTATCCAAAAGACAAATGCACAGGAAATGAAGTGGATTATCATGATAATCTTGAAAGATCTAAAGCTGGGAATTAGTGAAAAAAGCATTTTTCACGAGTTCCATCCTGATGCAGAAGACTTGTTTAATGTTACTTGTGACTTAAAATTAGTATGTGAAAAGCTAAGGGATCGGAATCAACGGCATAAGCGGCAGGATATTGAAGTTGGAAAAGCTGTGCGCCCCCAATTAGCTAAGAGAGTTGCTAATGCAACTGAAGCATGGAAGAAGCTTCATGGGAAGGAAGTGGTTGTTGAGTGCAAATTTGATGGCGACCGAATTCAAATTCATAAAAATGGACCCGAGATACACTTTTTCTCAAGGAACTTCATTGATCATTCTGAATATGCACATGCAATGTCAGAAATCATAATACAAAATGTTCTTGTAGATAGGTGTATCCTTGATGGTGAAATGTTGGTGTGGGACACATCCTCGAAACGCTTTGCTGAGTTTGGCACAAATCAGGAAATAGGCATGTACTTTAATATGGATTGA 993 0.4804 MATEQTKFSVLCSLFKWTQQTKSAARKRSKFRKFLDAYCIDRNFFPAIRLILPNLDRERGSYGLKESILATSLIDALGISRDSPDALRLVNWRKGGAATGATAGNFALVAAEVLHLRQGTASGGLTIRELNELLDRLASGENRAEKILVLSTLIQKTNAQEMKWIIMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRNQRHKRQDIEVGKAVRPQLAKRVANATEAWKKLHGKEVVVECKFDGDRIQIHKNGPEIHFFSRNFIDHSEYAHAMSEIIIQNVLVDRCILDGEMLVWDTSSKRFAEFGTNQEIGMYFNMD 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02772 330 Pfam DNA ligase N terminus 7 187 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Phco7g02772 330 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 186 310 - -
Phco7g02772 330 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 251 259 IPR016059 GO:0003909
Phco7g02772 330 FunFam DNA ligase 2 219 - -
Phco7g02772 330 PANTHER DNA LIGASE 4 4 323 IPR029710 GO:0003677|GO:0003910|GO:0005524|GO:0006281|GO:0051103
Phco7g02772 330 Pfam ATP dependent DNA ligase domain 227 321 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Phco7g02772 330 Gene3D - 1 219 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Phco7g02772 330 Gene3D DNA ligase/mRNA capping enzyme 221 327 - -
Phco7g02772 330 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 4 210 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02772 7 46816095 46822591 Phco7g02772 7 46816095 46822591 ECH