LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco7g02717	ATGGGTGATAGCAGTGTTCCATCTGGGTCTCCAAATGCAAAACCAGATCTTGTTGATGGAGACTCAGTGGTTTCCAATAACGCCTCGTTGGAAACCATTGTGCAAAGTTTCCAAGATTCAATGTCTCTTGGTAAGAGACACAAGTTCTGGGAAACACAACCTGTTGGGCAATACAAGGATGTTGGGGATGCAAGTTTGTCTGAAGGACCCATTGAGCCCCCAACACCTTTGTCCGAGGTTAAGCAGGAGCCTTATAACCTTCCTAATGCTTATGAGTGGACCACATGTGACATGGAGTCTGCGGAAACCTGTGATGAGGTTTATGTTCTGCTGAAGAACAACTATGTTGAGGACGATGAAAACATGTTCAGGTTCAACTATTCCAAGGAGTTCCTCAGTTGGGCGTTGCGCGTTCCGGGGTATTACCGGAGTTGGCACATTGGTGTGCGTGCCAAGGCCTCGAAGAAGTTGGTTGCTTTCATCAGTGGCGTACCTGCAAGGATCAGAGTTAATACGGAGATTGTGAAGATGGCTGAGATCAATTTCTTGTGTGTTCATAAGAAGCTCAGGTCGAAGAGGCTTGCGCCTGTTATGATCAAGGAGGTCACCAGAAGGGTTCATTTGGAGAATATTTGGCAGGCGGCTTATACAGCTGGGGTTGTGCTTCCAACACCAATCACGACTTGTCAGTATTGGCACCGATCGTTGAATCCGAAGAAGCTGATTGATGTTGGGTTTTCAAGGCTTGGTGCAAGGATGACGATGAGTCGCACAATCAAACTTTACAAATTGCCGGATTCCCCGGTTACTCCTGGATTCAGGAAAATGGAGCTTCGGGATGTGCCGGCTGTGACTCGGCTGCTTAGAAACTACTTGAGCCAGTTTGTTGTTGCACCTGATTTGGATGAAAATGATGTTGAGCACTGGCTACTTCCCAATGAGAATGTGGTGGATAGTTTCTTGGTGGAGAGTCCGGGGAGTCATGAAATCACTGACTTCTGCAGCTTCTACACTCTCCCCTCTTCGATCCTTGGAAATCAAAATTACTCAATTTTGAAAGCTGCTTATTCTTATTATAATGTCTCCACCAAAACCCCATTGACCCAGTTGATGAATGATGTACTAATTGTAGCAAAGCAAAAGGATTTTGACGTTTTCAATGCCTTGGATGTGATGCACAATGAGAATTTCCTCAAAGAGCTCAAGTTTGGACCGGGAGATGGACAGCTTCACTACTACTTGTACAATTATAGGATTCGTAATGCCTTGAAACCAACTGGACTTGGGCTTGTGCTTTTGTAG	1302	0.4555	MGDSSVPSGSPNAKPDLVDGDSVVSNNASLETIVQSFQDSMSLGKRHKFWETQPVGQYKDVGDASLSEGPIEPPTPLSEVKQEPYNLPNAYEWTTCDMESAETCDEVYVLLKNNYVEDDENMFRFNYSKEFLSWALRVPGYYRSWHIGVRAKASKKLVAFISGVPARIRVNTEIVKMAEINFLCVHKKLRSKRLAPVMIKEVTRRVHLENIWQAAYTAGVVLPTPITTCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPDSPVTPGFRKMELRDVPAVTRLLRNYLSQFVVAPDLDENDVEHWLLPNENVVDSFLVESPGSHEITDFCSFYTLPSSILGNQNYSILKAAYSYYNVSTKTPLTQLMNDVLIVAKQKDFDVFNALDVMHNENFLKELKFGPGDGQLHYYLYNYRIRNALKPTGLGLVLL	433

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco7g02717	433	ProSitePatterns	Myristoyl-CoA:protein N-myristoyltransferase signature 1.	179	187	IPR022678	GO:0004379
	Phco7g02717	433	Pfam	Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain	70	229	IPR022676	GO:0004379
	Phco7g02717	433	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	45	230	IPR016181	-
	Phco7g02717	433	PANTHER	N-MYRISTOYL TRANSFERASE	33	433	IPR000903	GO:0004379\|GO:0006499
	Phco7g02717	433	FunFam	Glycylpeptide N-tetradecanoyltransferase	39	433	-	-
	Phco7g02717	433	MobiDBLite	consensus disorder prediction	1	23	-	-
	Phco7g02717	433	SUPERFAMILY	Acyl-CoA N-acyltransferases (Nat)	231	433	IPR016181	-
	Phco7g02717	433	PIRSF	N-myristl_transf	9	433	IPR000903	GO:0004379\|GO:0006499
	Phco7g02717	433	ProSitePatterns	Myristoyl-CoA:protein N-myristoyltransferase signature 2.	402	408	IPR022678	GO:0004379
	Phco7g02717	433	Pfam	Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain	243	421	IPR022677	GO:0004379
	Phco7g02717	433	Gene3D	-	39	433	-	-
	Phco7g02717	433	FunFam	Glycylpeptide N-tetradecanoyltransferase	44	215	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco7g02717	Phco-Chr7	46158041	46159342	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco7g02717	7	46158041	46159342	Phco7g02717	7	46158041	46159342	ECH