Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02711 ATGGAGGAAATAACTTCGACGGTTGCAGTGCCATTTGCACTTGGGAATTTGATACAAAAAGATCCATCAGTGACAACCCACATGGAGATAACTGGCCTAAAGCTCAGGGCAAATACTGCACCAGTTTTAATATTAAATCCTGCAATTGCAAGGGAAAATCACACAGATATGGGTCCTCAACCCCAAAATAAAGTGTCTTCAGAGGCAAAGGACAACCAGGTTGGAGCTGATTTTGTCTCAGAAATGGTAAGTCAAGGAGACAATAATTGTTTCCATGCTGAAAACCAAAAGCAGGCAAGGAAAGAAAATCAATCATTGTTAGCTAAGGATTTCCAATGTGAGCATATCTCTCAATCTGCAGCTGGTGACAAAAGTAGTCCTTGTAGGGATGAATCTTCTGTTTCTAGGGCTAATTGTTGTGAAATAAGTTCACCTATCACCATAAAGGTTGATGATAACACAATTCATGGAAGGGCCGGTTCGACTGAGCCGCCAGGTGCAGCTATAGAGCCACTGCAGAACATGGTTTCTGTTGCTAGGGGACAGGAGAGTGAAGATGGAAGTGGATCAGACGAGTCTGATAAAAAACCATTTGACGTGGTTCATGAGATGCCAGAGAAGGCAACATGCTTGGAATTGAGTGGTGCTACCAGTACGACCAGTACTACCCCACTTTGGGGTTGCTCATCAGTTTGTGGAAGGAGAGAGGAGATGGAAGATGCTATTGCTATTAGGCCTCATCTTTTTCAAGTCACTTCAATGATGGTAATGGATGATTATGTGAGTGAAAACTCTAAATTTTCACCAGCCCACTTTTTTGGTGTGTATGATGGACATGGGGGCTGTCAGGTTGCCAATTACTGCCGGGAACATCTTCATTCTGTGTTGGTTGATGAGATAAAAGCTGCACAATCGAGTTTGGAAGAACAGAATGGGAGGGAAAACTTGGAGGACCAATGGAAGAAGGCATTCTCCAATTGCTTTCACAAAGTAGATGATGAAGTTGGAGGGGTTGCTGAAGATAATGGAGCAAGTGTTGAACCTCTTGCTTCTGAGGCTGTTGGCTCCACTGCTGTGGTTGCCCTTTTGACTCAAACTCACATAATAGTTGCAAACTGTGGAGATTCAAGAGCTGTCTTGTGTCGTGGAAAAGAAGCAATACCAATGTCTGATGATCACAAACCAAATAGAGAAGATGAATGGGAAAGGATTGAAGCTTCAGGAGGAAGGGTCATACAATGGAATGGGTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGGTACTTGAAACCATGGGTAATTCCAGAGCCAGAAGTGAAGTGTGTCCAAAGAGACAAAAACGATGAGTTCCTCGTTCTGGCCAGTGATGGATTATGGGATGTCATGACAAATGAAGAAGCCTGTGACTTTGCAAGAAGGAGAATCCTTCTTTGGCATAAGAAGAATGGCAACAACTCATCATCACCACCAGGCCAAGGACCTGACCCTGCAGCTCAGTATGCTGCAGAGTATCTATCTAGACTTGCCCTTCAAAGAGGAAGCAAAGATAACATCTCTGTCATTGTTATAGACTTGAAGCCCCAAAGAAAATTCAAGAAAAAAGAATAA 1623 0.4338 MEEITSTVAVPFALGNLIQKDPSVTTHMEITGLKLRANTAPVLILNPAIARENHTDMGPQPQNKVSSEAKDNQVGADFVSEMVSQGDNNCFHAENQKQARKENQSLLAKDFQCEHISQSAAGDKSSPCRDESSVSRANCCEISSPITIKVDDNTIHGRAGSTEPPGAAIEPLQNMVSVARGQESEDGSGSDESDKKPFDVVHEMPEKATCLELSGATSTTSTTPLWGCSSVCGRREEMEDAIAIRPHLFQVTSMMVMDDYVSENSKFSPAHFFGVYDGHGGCQVANYCREHLHSVLVDEIKAAQSSLEEQNGRENLEDQWKKAFSNCFHKVDDEVGGVAEDNGASVEPLASEAVGSTAVVALLTQTHIIVANCGDSRAVLCRGKEAIPMSDDHKPNREDEWERIEASGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPEPEVKCVQRDKNDEFLVLASDGLWDVMTNEEACDFARRRILLWHKKNGNNSSSPPGQGPDPAAQYAAEYLSRLALQRGSKDNISVIVIDLKPQRKFKKKE 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02711 540 FunFam Protein phosphatase 2C 16 214 540 - -
Phco7g02711 540 CDD PP2Cc 227 530 IPR001932 -
Phco7g02711 540 ProSiteProfiles PPM-type phosphatase domain profile. 225 530 IPR001932 -
Phco7g02711 540 Pfam Protein phosphatase 2C 229 523 IPR001932 -
Phco7g02711 540 SMART PP2C_4 215 528 IPR001932 -
Phco7g02711 540 ProSitePatterns PPM-type phosphatase domain signature. 272 280 IPR000222 GO:0043169
Phco7g02711 540 PANTHER PROTEIN PHOSPHATASE 179 530 IPR015655 GO:0004722|GO:0006470
Phco7g02711 540 Gene3D - 214 540 IPR036457 -
Phco7g02711 540 SUPERFAMILY PP2C-like 223 532 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02711 Phco-Chr7 46074731 46077168 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g01911 8 20197723 20200298 Phco7g02711 7 46074731 46077168 PCT