Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02702 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAGCTTCTGCGGGAAAATAAGAGGATGCTGGACAAATCAATTAGAGAAATTGAGCGCGAGCGGCAAGGTTTGCAAGCACAAGAGAAGAAATTGATTTTGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTTAGAGTCATGGCAAAAGATCTAGTTAGAACAAGGCATCAGGTTGAGAAGTTTTATAAGCTAAAATCTCAGCTCCAAGGTGTATCACTCCGAATTCAGACTTTGAAATCAACGCAAGCAATGGGTGAGGCTATGAAAGGCGTGACAAAGGCCATGGGGCAAATGAATAGGCAGATGAACTTGCCATCTCTGCAGAAAATCATGCAAGAATTTGAGAGACAGAATGAGAAGATGGAATTGACATCTGAGATGATGGGAGATGCAATAGATGATGCTTTGGAAGGAGAAGAGGATGAAGAAGAAACTGAAGATCTAGTGAGCCAAGTTCTTGATGAGATTGGAATTGACATCAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCAAAGACCAAGGTACCTCAAGTTGAAACTACTGGAAATGATGATGGAGGAGGGATAGATAGTGACTTACAGGCAAGGTTAGACAATTTAAGAAAAATGTAG 675 0.4207 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQAQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEMMGDAIDDALEGEEDEEETEDLVSQVLDEIGIDINQELVNAPSSAVAAPAAKTKVPQVETTGNDDGGGIDSDLQARLDNLRKM 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02702 224 Pfam Snf7 17 186 IPR005024 GO:0007034
Phco7g02702 224 Coils Coil 119 139 - -
Phco7g02702 224 Gene3D - 6 181 - -
Phco7g02702 224 MobiDBLite consensus disorder prediction 184 213 - -
Phco7g02702 224 Coils Coil 12 46 - -
Phco7g02702 224 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 4 222 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02702 Phco-Chr7 45991326 45996262 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02702 7 45991326 45996262 Phco7g02702 7 45991326 45996262 ECH
Phco8g01926 8 20394830 20397452 Phco7g02702 7 45991326 45996262 PCT