Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02685 ATGGTTCAATCCAAAACCACTCAAAACCCCTCTAAACCCCACGCCATCCACCCACTCACACCCGCCCAAACCCGAGAACCTTCCTCCCTTTCCGCCTCTCCCCCTCCTCGCCGCCGCAGCCTCCGCCTTGCCTCCCTCTCCGACGCCTCCCCCGCCGCCTCCAAACGCCTGGCCTTCCTCAACTTAAGATCGGGAAAGAGGGTTCTCAAGAGAGCGATGGCAAACGACGCAGAGGAACAAGGTGATGACGCAAACGATGAAGCTGATGACATTGATGTCAATGTCACAACACGAGAGTCTACAACGGAAAACTCAGCCGTCAATGTCAATATTATTGCAGATGATCCCGCTGTTAGGGTTTCCACTGGGAACCGGAAGCGCAAGAGTGACTCAACCGGTTCCGAACGCGAGGAGTTTCTCTGCTTAAGGTCGGGAAAGAAGGCTCTCAGGAGAACAATGACTTTCGAGTCCGAAGAACAAGTTACTAACGCAAATGATAATGATAATGATAATGATAATGATACCGATGATGATGACGACGACGCGGCAGTGGCGGTTGATGGCGACGTGGCAACGCCGGAATCCAGAACGGAGAGCTCCGGTGTGAATAATGTACCTGCGCAAGTTCGAGAACGTTCTAGAAACTCCAATGCTAGAGAGCGCCGTTCCGGATTGAGGAGGAACGATTATATGGAACGCTTCCACGACATTGCGCGGGAAAACGCGTCGCGGTTTGCTTTCTTCGCACCGGAAGAGGAAGATGATGGCCGGTCGCCGCCGGTTCCCGAAGCCGCGCGTGAGGAAATTGAGGACTGGCCCGGTCCTTTCTCCACGGCTATGAAAATCATCCGAGACCGAGGGATGAATCTTCAGAACGCTCAAACGAGTTCTCAGACGAACTTGTGCGAGTCTATTAAGTGGGTTCCCAAGGCGCATAAAGGGGATGTGGGCGTTTTATCGGTCCCTTCGTTGCAAGATATGTGCTTTAGGATTCTTGTGAGCAATGTTGATGCGATTGCATCGCTCGAGAGTGTGCCTGATGCGTTGAGGCACCGGCTTAGCCAGTTGCTCTGTGACTCGAGGAGAATTAACGGTCACTTTCTAGAGCTTCTTGTGCGTGGAACTCCCACGGAGATTCGGTTAAGAGACTGCTCGTGGTTGACTGAGGAACAGTTTACCGAGTGCTTTCGAATGTGTAACACGGAGAATTTGTCGGTACTGCAACTTGACCAGTGTGGGCGATGCTTGCCTGATTTTGTAATAGTTGCTACTTTAGCACGGTCACCTAGGAATTTGGCTAGATTAACCACCCTATCACTTCGTGGTGCATGCCGACTTTCAGATGGAGGTTTGCATGCACTTGTTTCTTCGGCTCCTGCACTTAGATCGATAAATCTCAGCCAGTGCTCCCTTCTCACATCTGCTAGTATATATTTATTGGCTGAATCATTAAGATATCTTCTGAAAGAGTTGTTCCTTGATGATTGCCAAGGCATTGATGCTGCACTAATTGTGCCAGCACTGATTGAGCTTGAACATTTAGAAGTGTTGTCAGTAGCTGGTATTCAAACTGTTTGTGATGAATTTGTCAAGAATTACATTGTTGCACGTGGCCAAAACATGAAAGAGCTCGTTTTGAAGGACTGTATAAACTTGACTGATTCATCAATCAAAGTTATTGTTGAGCATTGTCCAGGATTACAGGTGCTTGATATTATGAACCTGAACAGATTAACAGATTTATCTGTTGGATATCTTACTAATGGTTGCCGTGTACTTCATACCCTGAAGCTTTGCCGAAATCCATTCAGTGATGAAGCAATTGCTGCATTTGTGGAGACGACTGGAGGGTCCCTGAAGGAACTGTCACTTAATAACATCAAGAAGGTTGGTTACCACACAACCTTGTCACTTGCAAACCATGCGAAAAAATTGCATTATCTGGATTTATCTTGGTGTAGAAATTTGACAGACAATGCACTGGGTTTGATTGTGGATAGCTGCTTGGCGCTGAGGTTACTCAGACTTTTTGGATGCACTCAGGTAACAGATGCATTTCTTAATGGCCACTCAAACCTACAGATACAGATAATTGGTTTGAAAATGTCTCCTGTTTTACAACATGTCAAAGTTCCAGATCCTCACCAGGGTGCTTTGAATTATTCATCAGTCTCTTTAGATTTGGTATAA 2190 0.4731 MVQSKTTQNPSKPHAIHPLTPAQTREPSSLSASPPPRRRSLRLASLSDASPAASKRLAFLNLRSGKRVLKRAMANDAEEQGDDANDEADDIDVNVTTRESTTENSAVNVNIIADDPAVRVSTGNRKRKSDSTGSEREEFLCLRSGKKALRRTMTFESEEQVTNANDNDNDNDNDTDDDDDDAAVAVDGDVATPESRTESSGVNNVPAQVRERSRNSNARERRSGLRRNDYMERFHDIARENASRFAFFAPEEEDDGRSPPVPEAAREEIEDWPGPFSTAMKIIRDRGMNLQNAQTSSQTNLCESIKWVPKAHKGDVGVLSVPSLQDMCFRILVSNVDAIASLESVPDALRHRLSQLLCDSRRINGHFLELLVRGTPTEIRLRDCSWLTEEQFTECFRMCNTENLSVLQLDQCGRCLPDFVIVATLARSPRNLARLTTLSLRGACRLSDGGLHALVSSAPALRSINLSQCSLLTSASIYLLAESLRYLLKELFLDDCQGIDAALIVPALIELEHLEVLSVAGIQTVCDEFVKNYIVARGQNMKELVLKDCINLTDSSIKVIVEHCPGLQVLDIMNLNRLTDLSVGYLTNGCRVLHTLKLCRNPFSDEAIAAFVETTGGSLKELSLNNIKKVGYHTTLSLANHAKKLHYLDLSWCRNLTDNALGLIVDSCLALRLLRLFGCTQVTDAFLNGHSNLQIQIIGLKMSPVLQHVKVPDPHQGALNYSSVSLDLV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02685 729 SMART LRR_CC_2 590 614 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 538 563 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 458 483 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 668 693 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 642 667 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 564 589 IPR006553 -
Phco7g02685 729 SMART LRR_CC_2 432 457 IPR006553 -
Phco7g02685 729 MobiDBLite consensus disorder prediction 163 185 - -
Phco7g02685 729 PANTHER UNCHARACTERIZED 348 692 - -
Phco7g02685 729 Coils Coil 74 94 - -
Phco7g02685 729 MobiDBLite consensus disorder prediction 73 102 - -
Phco7g02685 729 FunFam F-box/LRR protein 537 714 - -
Phco7g02685 729 SUPERFAMILY RNI-like 378 686 - -
Phco7g02685 729 MobiDBLite consensus disorder prediction 193 212 - -
Phco7g02685 729 Gene3D Ribonuclease Inhibitor 529 711 IPR032675 -
Phco7g02685 729 Gene3D Ribonuclease Inhibitor 319 528 IPR032675 -
Phco7g02685 729 MobiDBLite consensus disorder prediction 154 225 - -
Phco7g02685 729 FunFam RNI-like superfamily protein 316 532 - -
Phco7g02685 729 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02685 Phco-Chr7 45805969 45810702 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02685 7 45805969 45810702 Phco7g02685 7 45805969 45810702 ECH
Phco8g01944 8 20593958 20597785 Phco7g02685 7 45805969 45810702 PCT