Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02681 ATGTTGATAAAACCAACCTTTTCCTTTGCTTCAAGTTATTATAGTTTTGGCCTGAGCGTACCTCCATTGAAGATTCCACAACAGTGGGAGAGATCAACGAACAGAAAGAGAGTGGAAAACATGGCGCGGTTCTCAGTGGTGTGGTGCACGGTGGCGGTGCTATTGTGCGCCGTGGCGGGTGGATCGTGGCTGGAGGACGCGAATCCGATTCGGATGGTGTCGGACGTCGAGGCGCAGGTGATTCAGGTGATAGGTCAGTGCCGGAGCGCGGTGTCGTTTGCGCGGTTCGTTGGGAGGTTCGGGAAGACGTACCGTAACGAGGAAGAGATGAAGCAGAGGTTCGAGATATTCTCGCAGAACCTCAGGTTCATCCGCTCCATCAACAAGAAACGCTTGTCCTACACTCTCGCCGTTAATCATTTTGCTGATTGGACTTGGGAGGAGTTCAAAAGACACAGACTAGGTGCTGCTCAAAATTGCTCTGCCACTCACAAAGGCAACCACAAGCTTACAGATGCTGTTCTTCCTCCAACGAAAGACTGGAGACAAGAAAATATAGTCAGCTCAGTTAAAGATCAAGGCAGCTGCGGATCATGCTGGACATTCAGCACAACTGGGGCTTTAGAAGCAGCCTATGCACAGGCACATGGAAAGAGTATCTCTCTTTCTGAGCAGCAGCTAGTGGATTGTGCTGGTGATTTCAACAACTTTGGCTGTAATGGTGGGTTGCCATCCCAAGCCTTTGAGTACATTAAATACAATGGGGGGCTTGAGACAGAGGAAGCATATCCCTACACGGGAAAAGATGGTGTCTGCAAATTTTCAGCTGAAAATGTTGGGATTCAAGTCCTTGATTCTGTCAATATCACCTTGGGTGCTGAGGATGAATTAAAACATGCAGTTGCATTTGTTCGACCAGTTAGTGTGGCCTTTGAGGTGGTTAGTGGGTTCCGATTCTATGAGAAAGGAGTTTACACCAGTGACACTTGCGGTAGCACTCCCCTGGACGTGAACCATGCTGTTCTTGCTGTTGGGTATGGAGTTGAAAATGGTGTCCCATTTTGGCTCATTAAAAATTCATGGGGAGAAAACTGGGGTGACAGTGGCTACTTCAAGATGGAATTGGGGAAGAACATGTGCGGTGTTGCAACTTGTGCTTCTTATCCAATTGTGGCCTAA 1179 0.4826 MLIKPTFSFASSYYSFGLSVPPLKIPQQWERSTNRKRVENMARFSVVWCTVAVLLCAVAGGSWLEDANPIRMVSDVEAQVIQVIGQCRSAVSFARFVGRFGKTYRNEEEMKQRFEIFSQNLRFIRSINKKRLSYTLAVNHFADWTWEEFKRHRLGAAQNCSATHKGNHKLTDAVLPPTKDWRQENIVSSVKDQGSCGSCWTFSTTGALEAAYAQAHGKSISLSEQQLVDCAGDFNNFGCNGGLPSQAFEYIKYNGGLETEEAYPYTGKDGVCKFSAENVGIQVLDSVNITLGAEDELKHAVAFVRPVSVAFEVVSGFRFYEKGVYTSDTCGSTPLDVNHAVLAVGYGVENGVPFWLIKNSWGENWGDSGYFKMELGKNMCGVATCASYPIVA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02681 392 CDD Peptidase_C1A 176 389 IPR039417 -
Phco7g02681 392 SMART pept_c1 175 390 IPR000668 GO:0006508|GO:0008234
Phco7g02681 392 Pfam Cathepsin propeptide inhibitor domain (I29) 93 149 IPR013201 -
Phco7g02681 392 PRINTS Papain cysteine protease (C1) family signature 193 208 IPR000668 GO:0006508|GO:0008234
Phco7g02681 392 PRINTS Papain cysteine protease (C1) family signature 339 349 IPR000668 GO:0006508|GO:0008234
Phco7g02681 392 PRINTS Papain cysteine protease (C1) family signature 354 360 IPR000668 GO:0006508|GO:0008234
Phco7g02681 392 Pfam Papain family cysteine protease 175 390 IPR000668 GO:0006508|GO:0008234
Phco7g02681 392 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 354 373 IPR025661 -
Phco7g02681 392 Gene3D Cysteine proteinases 84 391 - -
Phco7g02681 392 SMART Inhibitor_I29_2 93 149 IPR013201 -
Phco7g02681 392 SUPERFAMILY Cysteine proteinases 90 390 IPR038765 -
Phco7g02681 392 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 193 204 IPR000169 -
Phco7g02681 392 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 337 347 IPR025660 -
Phco7g02681 392 FunFam Cysteine proteinase 2, putative 86 391 - -
Phco7g02681 392 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 93 384 IPR013128 GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02681 Phco-Chr7 45778833 45784838 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02681 7 45778833 45784838 Phco7g02681 7 45778833 45784838 ECH