Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02677 ATGGGTTCTGAAAATAAGAGCTTCGAGTTTTTGAAGGAGATCGGCTTGGGTTCCTCCAATATTGGCTCTTATGTTAATGGCCAATGGAAAGCCACTGGTTCTTCTGTCACTTCTGTTAATCCTTCTAACAATCAGACCATAGCTGAAGTGACTGAAGCTACTTTGCAAGATTATGAGGAGGGCTTGCAAGCTTGCAGTGAAGCAGCGAAGACATGGATGACTATTCCGGCACCAAAGAGAGGTGAGATTGTGAGACAGATTGGTGAAGCTTTGAGGGCCAAATTGGATCCTCTGGGTAGGCTGGTGTCTCTTGAGATGGGAAAAATTCTTCCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGACTACGCTGTTGGGCTAAGCCGACAATTGAATGGATCAATTATACCATCAGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCCCTTGGAATAGTTGGTGTAATCACCGCTTTCAACTTTCCATGTGCAGTTCTAGGGTGGAATGCTTGCATTGCATTGGTCTGTGGCAACTGTGTAGTGTGGAAGGGTGCTCCAACAACTCCTTTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTACCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCTGACATTGGTCAGGCAATAGCAAAAGATACACGCATTCCCCTGGTTTCATTCACTGGAAGTACAAAGGTGGGCTTGATGGTGCAGCAAACAGTGAATGACAGATTTGGCAAGTGTTTGCTTGAGTTGAGTGGAAACAATGCAATAATAGTCATGGATGATGCAGACATTAAACTGGCTGTACGCTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGTTGTACAACCTGCCGAAGACTGTTTTTGCACGAGAGCATTTACACGAATGTACTAGACCAACTTGTTGGACTATACAAACAAGTCAAGATTGGGAACCCCTTGGAGAAGGGGACTCTAGTTGGGCCATTGCATACTCGTACTTCCGTGGAAAACTTTCAGAAGGGTATTTCAGTCATAAAATCCCAGGGAGGGAAGATCTTAACAGGTGGATCTGTGTTAGAGTCAGAAGGAAATTTTGTACAACCAACGATTGTTGAGATATCTTCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGGTCCAGTTCTTTATGTCATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTAAGTAGTTCAATCTTTACACAAAGACCTGGAACTATATTCAAATGGATCGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGCAAACATACCTACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCGACTGGTGGTGGTCGTGAAGCAGGAAGTGACTCATGGAAGCAATACATGCGTCGTTCTACGTGTACCATCAATTATGGAAGTGAACTGCCGTTAGCTCAGGGAATTAACTTTGGCTAG 1527 0.4381 MGSENKSFEFLKEIGLGSSNIGSYVNGQWKATGSSVTSVNPSNNQTIAEVTEATLQDYEEGLQACSEAAKTWMTIPAPKRGEIVRQIGEALRAKLDPLGRLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSTKVGLMVQQTVNDRFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLDQLVGLYKQVKIGNPLEKGTLVGPLHTRTSVENFQKGISVIKSQGGKILTGGSVLESEGNFVQPTIVEISSDAPVVKEELFGPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTQRPGTIFKWIGPRGSDCGIVNANIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02677 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Phco7g02677 508 Pfam Aldehyde dehydrogenase family 33 488 IPR015590 GO:0016491
Phco7g02677 508 SUPERFAMILY ALDH-like 20 497 IPR016161 GO:0016491
Phco7g02677 508 CDD ALDH_F7_AASADH 24 496 - -
Phco7g02677 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 485 IPR016162 GO:0016491
Phco7g02677 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Phco7g02677 508 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 269 460 - -
Phco7g02677 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 4 508 IPR044638 GO:0004029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02677 Phco-Chr7 45717400 45722595 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02677 7 45717400 45722595 Phco7g02677 7 45717400 45722595 ECH