Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02675 ATGGCACTGAAGGAGAAAGGGATTGCAGCAGATTTTCTCTCCTCAACAAAAACCGCGGATGCTAAAGTAAAGATTCACGAGGACCTTGATTCTGGAAAACCTTCTACAAGGCTGCTATATGTGACTCCAGAGTTGATAGCAACACCAGGGTTTATGTCAAAGCTGACCAAGATTTATACTAGAGGTCTGCTAACTCTCATTGCCATAGATGAGGCGCATTGCATCTCAAGTTGGGGACATGATTTCAGACCTAGCTACCGTAAGCTTTCATCTTTGAGAAGCCACCTACCAGATGTACCAATATTAGCTTTGACTGCTACTGCTGCACCAAAGGTTCAGAGGGATGTAGTTGAATCCTTGCGGATGCAAAATCCGTTAATACTCAAGTCTTCATTTAATCGTCCAAATATATATTATGAAGTTAGATACAAAGATCTATTGGATGATGCTTTTGCTGATTTATCTAATACACTCAAATCTCTTGGAGATGTCTGTGCAATAGTGTACTGCCTTGAACGTTCAATGTGTGATGACTTGTCAAGTAATCTATCCCAAAGTGGCATTTCATGTGCTGCTTATCATGCAGGATTGAATAATAAAATGCGAACTTCGGTATTAGATGATTGGATTTCTTCTAAGATAAAAGTTGTTGTTGCCACTGTTGCTTTTGGGTATGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCCAAGTCAATGGAAGCATTCTATCAAGAGTCTGGCAGAGCTGGTCGTGATCAATTGCCATCTAGAAGTCTGTTGTACTATGGGGTAGATGATCGCAAAAGAATGAAATTTATATTAAGTAAATCGGGGAGCAAGAACTCACAGTCATCTAGTTCACAAGAAGAATCATCCAAAATATCCCTTATTGCTTTCAATCAGATGGTTGAATACTGTGAAGGATCTGGATGCCGCAGGAAAAGGATTCTTGAGAGTTTTGGGGAACAGGTAACTGCATCACTATGTGGAAAAACATGTGATGCCTGCAGACATGCAAACTTAGTTGCCAGATGTTTGGAGGATCTCAAAACTGTTTCTGCTCTATGCCATAAAAATGGTTCTTCTCGAGTTTTTATAACCAGTTCCACCATCGGAATTGATGGAGAACAGTTATCTGAATTCTGGAATCGGGGAGAGGAAGCAAGTGGATCAGAGGAAGATATATCTGATTCAGAAGATGGTAATGAGGTTGTCAACAACCTAACCAGGTCAAAGCTTCAATCCAGATTGGGTGTAAATGAAAAGCTTGCTATGTTACAACGGGCAGAAGAAAACTTCTATAAAAATAATAACAGTTATAAACAGAGCAACAAAGTTGACAAGAATGCTATTTCTGATCCAATGCGAGGAGCCAGCAGGCAAAGGTTACAAAATGCTCTAAAACAGGTTCAGCAACGGCTTGACAACTTCAAGATTGAAGTGGATACGTCAGCATCTTTCCTTGAAGATGAATGCTACAAGAAATATGGCAAGGCTGGCAAATCATTCTATTATTCGCAAGTGGCAAGTACTGTAAGATGGCTGACGACTGCTAGCTCCAGCCAATTGATGAACCGACTTCGTTCAATTAATGCTTCTGCCTCAATGAGTCTCGTGTCCGAAGCTAAACAGTCCCTTACACCAGCTGAACAGCCCTTCAAATCGCCACCTGCTTTAGATCCTTGTGCCGAAGATACCAGCAATGAATACTCTGGCAATGCTAGATCAGAAACTTCTCCATGTATTGTGCCAATGGAAAGCTGTTCGTTTAATAATACCAACTTGCCACAAATACCATCCTTCTCTGAATTTGTCAATAGTAGGAAAACAAAAGGGGACCAGTTAAATGACACGAAGAAGCATTCAAGAGTCGAAAAGAAGATGAGGATGCAGTAA 1911 0.4055 MALKEKGIAADFLSSTKTADAKVKIHEDLDSGKPSTRLLYVTPELIATPGFMSKLTKIYTRGLLTLIAIDEAHCISSWGHDFRPSYRKLSSLRSHLPDVPILALTATAAPKVQRDVVESLRMQNPLILKSSFNRPNIYYEVRYKDLLDDAFADLSNTLKSLGDVCAIVYCLERSMCDDLSSNLSQSGISCAAYHAGLNNKMRTSVLDDWISSKIKVVVATVAFGYGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLYYGVDDRKRMKFILSKSGSKNSQSSSSQEESSKISLIAFNQMVEYCEGSGCRRKRILESFGEQVTASLCGKTCDACRHANLVARCLEDLKTVSALCHKNGSSRVFITSSTIGIDGEQLSEFWNRGEEASGSEEDISDSEDGNEVVNNLTRSKLQSRLGVNEKLAMLQRAEENFYKNNNSYKQSNKVDKNAISDPMRGASRQRLQNALKQVQQRLDNFKIEVDTSASFLEDECYKKYGKAGKSFYYSQVASTVRWLTTASSSQLMNRLRSINASASMSLVSEAKQSLTPAEQPFKSPPALDPCAEDTSNEYSGNARSETSPCIVPMESCSFNNTNLPQIPSFSEFVNSRKTKGDQLNDTKKHSRVEKKMRMQ 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02675 636 FunFam RecQ family DNA helicase 134 359 - -
Phco7g02675 636 Gene3D - 134 360 IPR027417 -
Phco7g02675 636 Pfam RecQ zinc-binding 271 342 IPR032284 -
Phco7g02675 636 Pfam Helicase conserved C-terminal domain 157 256 IPR001650 -
Phco7g02675 636 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 157 298 IPR001650 -
Phco7g02675 636 MobiDBLite consensus disorder prediction 615 636 - -
Phco7g02675 636 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 126 IPR014001 -
Phco7g02675 636 PANTHER DNA HELICASE RECQ FAMILY MEMBER 1 538 - -
Phco7g02675 636 Coils Coil 465 485 - -
Phco7g02675 636 CDD SF2_C_RecQ 134 267 - -
Phco7g02675 636 Gene3D - 1 133 IPR027417 -
Phco7g02675 636 NCBIfam RecQ family ATP-dependent DNA helicase 2 347 IPR004589 GO:0004386|GO:0006310
Phco7g02675 636 MobiDBLite consensus disorder prediction 607 636 - -
Phco7g02675 636 CDD DEXHc_RecQ 1 133 - -
Phco7g02675 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 359 IPR027417 -
Phco7g02675 636 MobiDBLite consensus disorder prediction 551 581 - -
Phco7g02675 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 127 IPR027417 -
Phco7g02675 636 SMART helicmild6 177 258 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02675 Phco-Chr7 45703249 45710095 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02675 7 45703249 45710095 Phco7g02675 7 45703249 45710095 ECH