Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02662 ATGGCTATGGCTCCTCTGAAAGCTTTCGTGTTGACTTGTTTTGTGAGCTTCTTGCTATACAGCATCAATGGCGTTGAAGTGAGTCATGATGGAAGAGCCATAAAAATTGATGGGAAAAGGAGGGTGCTAATATCTGGATCAATTCATTACCCTAGAAGCACACCAGGGATGTGGCCTGATTTGATAAAGAAAGCAAAAGAAGGAGGGTTAGATGCTATTGAAACATATGTGTTCTGGAATGCACATGAAGCTGTTCGTGGTGAATATGATTTCAATGGCAGAAACGATCTCATTAGGTTTCTGAAGACCATTCAAGACGAAGGCCTTTATGCTGTTCTTCGTATTGGTCCCTATGTCTGTGCCGAATGGGATTATGGAGGGATTCCTGTGTGGGTTTACAATCTTCCCGGTGTCGAGATTCGGACGGCAAATCAAGTTTACATGAATGCAATGCAAAATTTCACTACTCTGATTGTGGACATGGTCAGAAAAGAGAAATTGTTTGCCTCTGAAGGAGGTCCTATAATTATTTCTCAGATTGAGAATGAATATGGGAATGTGATGTCAAGTTATGGGGATGCTGGAAAAGCTTATATAGATTGGTGTGCAAAGATGGCTGAGTCCTTCAACATTGATGTTCCATGGATCATGTGCCAACAATCTGATGCCCCTCAACCAATGATCAATACTTGCAATGGTTGGTATTGTCACGACTTCAAGCCCAATAACCCTAACAGCCCAAAGATGTGGACTGAAAATTGGGTTGGCTGGTTCAAGAATTGGGGTAGCAAAGATCCACATAGAACTGCTGAAGATGTTGCCTATTCTGTGGCTAGGTTTTTTCAATCAGGTGGCACTTTCCAAAACTACTATATGTATCACGGTGGAACTAACTTTGGCAGAACAGCTGGTGGTCCATATATTACTACTACCTATGATTACGATGCTCCTCTTGATGAATTTGGAAACATAGCCCAACCAAAATGGGGTCACCTCAAAGAACTTCACAGGGTTCTGAAATCAATGGAGAATAGTCTAACTAATTATGGAAACGTATCTGAAGTTGATTTGGGCCACTTTGTTAAGGCTACTGTGTATGCCACAAATGATTCATCAAGCTGCTTCTTGACCAACACCAACACCACCAATGATGCTACAGTAACATTCAGAGGAAACAAATATAATATTCCTGCCTGGTCTGTTAGTCTTCTTCCTGATTGTCAAACTGAAGAGTATAACACAGCCAAGGTGAATGTTCAAACCTCCCTCATGGTAAAGGGTAGAAACAAAGCAGAAGATGAGCCAACGGCTTTGAATTGGGTGTGGAGAGCTGAGAATATTGATGATGCTCTTCTTGGCAAAGGAAATTTCTCCGAAAAGAGACTTATTGATCAAAAAACAGTTGCTTCTGATACTAGTGATTATCTTTGGTACATGACAAGACTTGATATTGATCAAAATGATCCAGTTTTGTCGGATAATATGTCTCTTAGCATCAATGGCAGTGGCCAAGTAATCCATGCATTCGTTAATGGAGAACATATTGGCTCCCATTGGGCCACATATGGTATCCGCAACGATAAATTTGAGCCTAAGATTAAGTTGAAGCCAGGAAAGAATATTGTCAGCTTGCTTAGTGTAACTGTTGGACTACAGAACTATGGACCAAACTATGATAAATGGCACACTGGTCTTGTTGGACCCATTAGTGTAATTAGCAGAAAAGATGATGAAACCGTGGTTAAAGATCTATCCTCAAACAAATGGTCTTACAAGGTTGGGTTACATGGTTGGGACAACAAATTCTTTAGTGAAGACTCTTCTTATGCTTCTGCTTCCAAATGGGAATCTGAGTACCTAACCACAAACAGAATGTTGACTTGGTACAAGACCACTTTCAAAGCTCCTCTTGGATCAGAGGGTGTTGTTGTGGATTTGCAAGGAATGGGAAAAGGGTACGCTTGGGTGAATGGTCATAATCTTGGTCGCACATGGCCTAGTTATGATGCAAGTGAAGAAGATTGTAGTGATGAACCTTGTGACTACCGTGGTGAATATGATGACAAAAAGTGTGTTACCAATTGTGGCAAGCCTACACAGAGATGGTACCATGTTCCTCGATCCTTTATCCAAGATGGTCTAAACACATTGGTTTTGTTTGAGGAAATTGGTGGGAATCCATCACTGGTGAATTTCCAAACAGTTTTTGTGGGGTCTGCATGTGGAAACACTCATGAGAACAAGACTTTGGAATTGTCCTGCCATGGACGTCCCATTTCTGATATAAAGTTTGCAAGTTTTGGCAACCCACAAGGTGAATGTGGAGCATTTAGCAAGGGCAGTTGCGAAAGCAAAAGTGATGCTTTGTCCATAGTACAGAATGCATGTGTGGGCAAGGAATCCTGCATCATTGATGTTTCAGAAAAAACATTCGGCTCAACAAATTGCGGAGATATGGTGAAGAGGCTTGCTGTGGAAGCAGTTTGTTAG 2490 0.4137 MAMAPLKAFVLTCFVSFLLYSINGVEVSHDGRAIKIDGKRRVLISGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEAVRGEYDFNGRNDLIRFLKTIQDEGLYAVLRIGPYVCAEWDYGGIPVWVYNLPGVEIRTANQVYMNAMQNFTTLIVDMVRKEKLFASEGGPIIISQIENEYGNVMSSYGDAGKAYIDWCAKMAESFNIDVPWIMCQQSDAPQPMINTCNGWYCHDFKPNNPNSPKMWTENWVGWFKNWGSKDPHRTAEDVAYSVARFFQSGGTFQNYYMYHGGTNFGRTAGGPYITTTYDYDAPLDEFGNIAQPKWGHLKELHRVLKSMENSLTNYGNVSEVDLGHFVKATVYATNDSSSCFLTNTNTTNDATVTFRGNKYNIPAWSVSLLPDCQTEEYNTAKVNVQTSLMVKGRNKAEDEPTALNWVWRAENIDDALLGKGNFSEKRLIDQKTVASDTSDYLWYMTRLDIDQNDPVLSDNMSLSINGSGQVIHAFVNGEHIGSHWATYGIRNDKFEPKIKLKPGKNIVSLLSVTVGLQNYGPNYDKWHTGLVGPISVISRKDDETVVKDLSSNKWSYKVGLHGWDNKFFSEDSSYASASKWESEYLTTNRMLTWYKTTFKAPLGSEGVVVDLQGMGKGYAWVNGHNLGRTWPSYDASEEDCSDEPCDYRGEYDDKKCVTNCGKPTQRWYHVPRSFIQDGLNTLVLFEEIGGNPSLVNFQTVFVGSACGNTHENKTLELSCHGRPISDIKFASFGNPQGECGAFSKGSCESKSDALSIVQNACVGKESCIIDVSEKTFGSTNCGDMVKRLAVEAVC 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02662 829 PANTHER BETA-GALACTOSIDASE RELATED 18 774 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 Pfam Galactose binding lectin domain 752 829 IPR000922 GO:0030246
Phco7g02662 829 SUPERFAMILY Galactose-binding domain-like 587 748 IPR008979 -
Phco7g02662 829 FunFam Beta-galactosidase 291 419 - -
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 651 667 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 624 638 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Phco7g02662 829 Pfam Glycosyl hydrolases family 35 35 337 IPR031330 -
Phco7g02662 829 SUPERFAMILY Galactose-binding domain-like 401 573 IPR008979 -
Phco7g02662 829 Gene3D Glycosidases 25 344 - -
Phco7g02662 829 FunFam Beta-galactosidase 444 581 - -
Phco7g02662 829 Gene3D - 738 829 IPR043159 -
Phco7g02662 829 Gene3D - 456 587 - -
Phco7g02662 829 ProSiteProfiles SUEL-type lectin domain profile. 744 829 IPR000922 GO:0030246
Phco7g02662 829 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Phco7g02662 829 Pfam Beta-sandwich domain in beta galactosidase 349 417 IPR041392 -
Phco7g02662 829 FunFam Beta-galactosidase 741 829 - -
Phco7g02662 829 CDD Gal_Rha_Lectin_BGal 745 829 - -
Phco7g02662 829 FunFam Beta-galactosidase 23 343 - -
Phco7g02662 829 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Phco7g02662 829 Gene3D - 589 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02662 Phco-Chr7 45561757 45566652 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02662 7 45561757 45566652 Phco7g02662 7 45561757 45566652 ECH