Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02652 ATGAGGACGTCGTCGTTTGGGAGATGCAGCAGCAGCGAGTACCAATTGCCGGAGAGCTTCGGCACCTCGTCGCCGGCAACCGGAGGACGCGCCTACGGCGCAATGATGCCGGTGTTCCTCAACGATCTCCGGAGCAACCACCACAAGGAGCTCGTGGAGATCACGCTGGAGCTCGAAAACGACGCCGTGGTGCTCTGCAACTTGACGCCGGCGGCCGCGTATTCCGCTCCCAATGCTTCTCCATTGTCAAGCAGCGGAGGAGGTGACGGCGGTGGCGGCGTGGCGCGGAGCCTCTCTATTACGTCGAGGATTCGGAGGAAGTTCCCGTGGCTGCGGTCGCTGTCGTCGGCGTCGGTGGAGAGTGTGGCCGCCGCTGAAGATCCGGTGACGATGGCGCGAAACGCACGGAAGATGAGAGCGAAGCTTGAACGGACGAGGTCGAGCGCGCAGAGAGCTCTGAAAGGTCTGAGATTCATCAGCAAGTCCGGGGAAGCCAGCGAGGAGTTGTGGGGAAAGGTGCAAGAACGGTTCAGCTTGTTGGCCAAGGATGGCTTACTCGCTCGAGAAGATTTCGGTGAATGCATAGGAATGGAAGATTCGAAGGAATTTGCAGTGTGTATATACGACGCATTGACTCGCAGGAAGGAAAGGAGAGTTAGTAGCATAAACAGAGAAGAGTTGCACGACTTCTGGTTGCAAATTTCAGACCAGAGTTTTGATGCTCGCCTGCAGATTTTCTTCGACATGGCAGACATTAACGAGGACGGAAGAATTACTAGAGAGGAAGTACAAGAGCTCATAATGCTCAGTGCTTCCGCAAACAAGTTATCAAAGCTAAAGGAACAAGCTGAAGGATACGCTTCGTTAATAATGGAAGAATTAGATCCAGAAAACCTGGGTTATATCGAGCTGTGGCAGCTAGAAATGTTGTTACTAGAGAAAGATAGGTACATGAACTACAGCAGACAACTGAGCAGCGCAAGTGTAAACTGGAGCCAAAATATGACCGAGACAATGCCTAGAAATGATATTCAAAGATTGCGCAGGACCCTCCAATGCCTTGCATTAGAGTATTGGAGAAGGGGTTGGATTTTGTTTTTGTGGTTAGTTACCACTGCTAGCCTCTTTGGCTGGAAATTTTACCAGTATAGAAACAGATCAACTTTCCAAGTCATGAGCTACTGCATACCAGTAGCCAAGGGTGCTGCGGAAACACTCAAGTTCAACATGGCTCTCATCCTCTTACCAGTTTGTCGAAACACTCTCACATGGCTTCGTTCCACCGGAGCCAGGAAGTTTGTGCCCTTCGATGACAACATTAATTTCCACAAGATGATTGCATTCGCCATAGCTGTTGCAGTCGCCATTCATGCCGGCAATCATCTGGCGTGTGATTTCCCCCTTCTCGTAAACTCATCTCCGGAAAAATTTTCACTTATATCTTCAGATTTCAATAACAAAAGACCCACTTACAAATCACTTCTGACCGGTGTAGAAGGCGTAACTGGAATCTCAATGGTTATTCTCATGGTCATCTCTTTCACTCTAGCAACTCACCACTTCCGAAGAAACGCACTGAGGCTTCCTTCACCCTTTAACAGATTGACAGGCTTCAACGCATTTTGGTACTCACACCACCTTTTTGCTCTGGTCTACGTTCTGCTACTCGTCCATGGACAATTCTTGTATTTGACCCATCGGTGGTACCAGAAAACAACATGGCTCTATATCTCTGTTCCTCTGTTGCTGTACATAGCAGAGCGTACTCTACGCACTCGAAGATCAGCACATTATACGGTGAAAATTATGAAGGTTTCGGGGCTACCAGGAAATGTCTTCAGCTTAATCATGTCTAAGCCTAATGGATTCAAGTACAAAAGCGGACAGTACATATTTTTACAATGTCCAAAAATTTCTCCCTTTGAGTGGCACCCGTTTTCCATCACCTCAGCTCCTGGAGACGAGTACCTAAGTGTTCACATCCGGATAGTGGGAGACTGGACCCAAGAACTTAAGCTTCTCCTAACAAAAGAAGATGACAAGTTGCCTACGGTTAAACGTGGTGCGACATTTGGTGAACTAATACAACTGGATCAAAGAGGGCAACCGAGGCTTCTTGTTGATGGCCCTTATGGAGCTCCAGCACAAGACTACCAGCGCTTTGATGTACTACTCCTCATAGGATTAGGAATAGGAGCAACTCCTTTCATTAGCATTCTCAGAGATCTTCTCAATAACACCAAAACAATGGATGAACCCGGGGAGCCATCAAACACAGAAACAAGTCAAGCAACCAGATCAGATGAGAGCTCCAATAGTTTTACATCGTCAAACTTAACACCAGGAGGAAATAAGAGATCACGAAGGACTACCAATGCTTATTTCTACTGGGTTACCAGGGAGCCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGACGAAGTTGCAGAAATGGACCACAAAGGGCAAATTGAGCTCCACAACTATCTTACAAGTGTCTATGAAGAGGGAGATGCGAGATCCACCTTAATCACCATGATCCAAGCACTGAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGGACACACTTTGCAAGGCCCAATTGGAAAGAGGTTTTCAACAAGATTGCCTCTAAACATCCGTTTTCTACAGTAGGGGTGTTCTATTGCGGGATGCCGGTATTGGCAAAGGAGCTAAAGAAGCTATCACTTGAACTGAGCCACAGAACAACTACACGCTTCGAGTTTCACAAGGAGTACTTCTGA 2781 0.4754 MRTSSFGRCSSSEYQLPESFGTSSPATGGRAYGAMMPVFLNDLRSNHHKELVEITLELENDAVVLCNLTPAAAYSAPNASPLSSSGGGDGGGGVARSLSITSRIRRKFPWLRSLSSASVESVAAAEDPVTMARNARKMRAKLERTRSSAQRALKGLRFISKSGEASEELWGKVQERFSLLAKDGLLAREDFGECIGMEDSKEFAVCIYDALTRRKERRVSSINREELHDFWLQISDQSFDARLQIFFDMADINEDGRITREEVQELIMLSASANKLSKLKEQAEGYASLIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSSASVNWSQNMTETMPRNDIQRLRRTLQCLALEYWRRGWILFLWLVTTASLFGWKFYQYRNRSTFQVMSYCIPVAKGAAETLKFNMALILLPVCRNTLTWLRSTGARKFVPFDDNINFHKMIAFAIAVAVAIHAGNHLACDFPLLVNSSPEKFSLISSDFNNKRPTYKSLLTGVEGVTGISMVILMVISFTLATHHFRRNALRLPSPFNRLTGFNAFWYSHHLFALVYVLLLVHGQFLYLTHRWYQKTTWLYISVPLLLYIAERTLRTRRSAHYTVKIMKVSGLPGNVFSLIMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRIVGDWTQELKLLLTKEDDKLPTVKRGATFGELIQLDQRGQPRLLVDGPYGAPAQDYQRFDVLLLIGLGIGATPFISILRDLLNNTKTMDEPGEPSNTETSQATRSDESSNSFTSSNLTPGGNKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFNKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHRTTTRFEFHKEYF 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02652 926 ProSiteProfiles EF-hand calcium-binding domain profile. 238 273 IPR002048 GO:0005509
Phco7g02652 926 Gene3D - 712 926 IPR039261 -
Phco7g02652 926 MobiDBLite consensus disorder prediction 748 786 - -
Phco7g02652 926 CDD NOX_Duox_like_FAD_NADP 602 878 - -
Phco7g02652 926 PRINTS Cytochrome B-245 heavy chain signature 538 558 IPR000778 GO:0016020|GO:0016491
Phco7g02652 926 PRINTS Cytochrome B-245 heavy chain signature 703 716 IPR000778 GO:0016020|GO:0016491
Phco7g02652 926 PRINTS Cytochrome B-245 heavy chain signature 726 743 IPR000778 GO:0016020|GO:0016491
Phco7g02652 926 PRINTS Cytochrome B-245 heavy chain signature 446 464 IPR000778 GO:0016020|GO:0016491
Phco7g02652 926 CDD EFh 221 268 IPR002048 GO:0005509
Phco7g02652 926 Pfam Respiratory burst NADPH oxidase 141 241 IPR013623 GO:0004601|GO:0050664
Phco7g02652 926 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 721 926 IPR039261 -
Phco7g02652 926 ProSitePatterns EF-hand calcium-binding domain. 251 263 IPR018247 -
Phco7g02652 926 Coils Coil 132 152 - -
Phco7g02652 926 FunFam Respiratory burst oxidase protein E 712 926 - -
Phco7g02652 926 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 595 717 IPR017927 GO:0016491
Phco7g02652 926 FunFam Respiratory burst oxidase homolog A 586 678 - -
Phco7g02652 926 Pfam Ferric reductase like transmembrane component 401 556 IPR013130 -
Phco7g02652 926 Pfam FAD-binding domain 599 714 IPR013112 GO:0016491
Phco7g02652 926 Pfam Ferric reductase NAD binding domain 721 908 IPR013121 GO:0016491
Phco7g02652 926 SUPERFAMILY Riboflavin synthase domain-like 598 714 IPR017938 -
Phco7g02652 926 MobiDBLite consensus disorder prediction 1 24 - -
Phco7g02652 926 FunFam Respiratory burst oxidase homolog A 142 259 - -
Phco7g02652 926 SUPERFAMILY EF-hand 158 323 IPR011992 -
Phco7g02652 926 Gene3D Translation factors 584 686 - -
Phco7g02652 926 Gene3D - 142 259 - -
Phco7g02652 926 PANTHER NADPH OXIDASE 203 926 - -
Phco7g02652 926 SFLD NADPH oxidase subgroup (NOX) 132 926 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02652 Phco-Chr7 45427307 45435210 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02652 7 45427307 45435210 Phco7g02652 7 45427307 45435210 ECH