Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02603 ATGATGGAATTTGGGTCCAAACCCGTTGACAAGAATTTGCTGATTTCGGCTCAGTTTCTTCACAAAGAGCTCGCCATTAGAATTGCCAGAAGAGCTATTGAGCTTGAGAATCTTCCCTATGGTTTGTCTCAAAAGCCTGCTGTTTTGAAGGTAAACTTGTTTCTCTACATTGCAGAATTGTGGCTTGTTGTTAATTCTGTGCTGTACTTTTTTCCCACCTATGGTGCCCTTGGTTCTGTTTTCTTTGGTTTTGGGGGTAATTATCATTATTTGGTCTTATCTGTTTATGGGGATTGGTATCTGGATTCTTTCCGTGATATCAGAGCCTTCCCTGATATAAAGAGTATGAACGATGAAAGAGTGTTCACTGAAATGATCAAGGCCATCAAAGTGAGACACAACAATGTGGTTCCCACAATGGCCTTAGGTGTTCAGCAGTTGAAGAAAGGTATGGATCCAAAGATTGTTTATGAAGATCTTGTCGAGATTCACCAGTTCCTTGATCGCTTTTACATGTCAAGAATTGGAATCCGTATGCTTATCGGGCAGCATGTTGAGTTGCACAATCCCAATCCTCCACCCTTTGTCGTGGGTTATATACATACAAAAATGTCTCCTGTTGAGGTGGCGACGAATGCCAGTGAGGATGCTCGTGCTATATGTTGTCGTGAATATGGAAATGCCCCTGGTGTCCAAATTTACGGAGATCCCAAATTTACTTTTCCATATGTTCCAGCGCATTTGCATCTTATGGTATTTGAGTTGGTTAAGAACTCACTTCGTGCTGTCCAAGAGCGTTTTATGGATTCTGATAAAGTTGCACCTCCCATTAGAATAATAGTTGCTGATGGGATAGAGGATGTTACCATAAAGGTCTCAGATGAGGGAGGTGGAATTCCAAGAAGTGGTTTGCCTAAAATTTTTACATATCTATACAGTACAGCCAGAAACCCATTGGATGAGCATTCAGATCTTGGAATAGGTGAGAATGTGACAATGGCTGGATATGGATATGGGCTTCCCATTAGTCGCCTATATGCTCGGTATTTTGGAGGTGATCTTCAAATGATCTCAATGGAAGGATATGGGACTGATGCATATCTCCATTTGTCTCGTTTGGGAGATTCACAAGAACCTTTGCCTTGA 1146 0.4154 MMEFGSKPVDKNLLISAQFLHKELAIRIARRAIELENLPYGLSQKPAVLKVNLFLYIAELWLVVNSVLYFFPTYGALGSVFFGFGGNYHYLVLSVYGDWYLDSFRDIRAFPDIKSMNDERVFTEMIKAIKVRHNNVVPTMALGVQQLKKGMDPKIVYEDLVEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPFVVGYIHTKMSPVEVATNASEDARAICCREYGNAPGVQIYGDPKFTFPYVPAHLHLMVFELVKNSLRAVQERFMDSDKVAPPIRIIVADGIEDVTIKVSDEGGGIPRSGLPKIFTYLYSTARNPLDEHSDLGIGENVTMAGYGYGLPISRLYARYFGGDLQMISMEGYGTDAYLHLSRLGDSQEPLP 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02603 381 PRINTS Bacterial sensor protein C-terminal signature 288 302 IPR004358 GO:0016310|GO:0016772
Phco7g02603 381 PRINTS Bacterial sensor protein C-terminal signature 334 352 IPR004358 GO:0016310|GO:0016772
Phco7g02603 381 PRINTS Bacterial sensor protein C-terminal signature 358 371 IPR004358 GO:0016310|GO:0016772
Phco7g02603 381 SMART HKATPase_4 243 374 IPR003594 -
Phco7g02603 381 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 371 IPR003594 -
Phco7g02603 381 Pfam Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 98 200 IPR018955 -
Phco7g02603 381 Pfam Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 1 52 IPR018955 -
Phco7g02603 381 ProSiteProfiles Histidine kinase domain profile. 248 374 IPR005467 -
Phco7g02603 381 SUPERFAMILY alpha-ketoacid dehydrogenase kinase, N-terminal domain 1 52 IPR036784 -
Phco7g02603 381 SUPERFAMILY alpha-ketoacid dehydrogenase kinase, N-terminal domain 97 191 IPR036784 -
Phco7g02603 381 PANTHER PYRUVATE DEHYDROGENASE KINASE 1 381 IPR039028 GO:0004672
Phco7g02603 381 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 203 370 IPR036890 -
Phco7g02603 381 FunFam [Pyruvate dehydrogenase (Acetyl-transferring)] kinase mitochondrial 203 380 - -
Phco7g02603 381 Gene3D - 1 63 IPR036784 -
Phco7g02603 381 Gene3D - 90 202 IPR036784 -
Phco7g02603 381 CDD HATPase_PDK-like 205 371 - -
Phco7g02603 381 Gene3D - 203 380 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02603 Phco-Chr7 44925688 44928672 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02603 7 44925688 44928672 Phco7g02603 7 44925688 44928672 ECH