Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02570 ATGGCTTGCGTGAAATTGGGTTCCAAAACTGATGCTTTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCCTTCCATCTTCATAAGTTCCCTTTGCTCTCTAGAAGTGGGGTTCTGGAAAGAAGGATTGCTGAGGTTTCTGAATCAGAGGAAGAATGTGTCATATCCCTCAGTGACATTCCTGGCGGTGCCAAAACATTTGAACTTGTTGCAAAATTCTGCTATGGAGTGAAACTTGAACTGACATCATCAAATGTTGTGTACCTTTGGTGTGCTGCAGAGCTTCTAGAAATGACTGAGGAATATGGTGAAGGTAATCTTATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTACTCCGCAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGATGATGTTTCGGAACATGCTGAAGAGCTCCACATTGTGAAAAGATGTATTGAATCACTAGCAGCAAAGGCGTCTACTGACCCAAATTTATTCGGGTGGCCAGTGCTGGAGCGTGGTGGTCCTTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAAAATTCAAGTGCAGATTGGTGGTATGAGGATGTATCGAATTTGAGTTTACCTCTTTATAAGAGATTAATAGCTATCATGGAATCTCGAGGCATTAGGCAGGAGATTATCGCCGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTATGTTAAATCGACGTCAGGTTTCTGGTGAGTCCAGCACCCGCCTGGCACAGGTAGCTATGGGGTCTCCACTATCTGAAGATGACCAGAAGATTCTGCTGGAAGAGATTGATGGTTTGCTCTCAATGCAGAAGGGCCTGGTCCAAACAAAGTTCTTGTTTGGTTTACTTCGAACAGCGATGATTCTACGAGTGAGCCCCTCTTGCATATCTAATTTGGAAAAACGGATTGGCATGCAGCTTGACCAAGCTACTCTAGAAGATCTCTTGATGCCAAATTTCTCATATTCTATGGAGACACTTTACAATGTTGAGTGCGTGCAAAGAATTCTTGACCATTTCCTTGCCATGGATCAGGTTACTGGCTGTGCCTCTCCATGCTCAATCGATGATGGTCAATTGATTGGATCACCTTCATTAACACCAATCACCATGGTAGCCAAGCTGATTGATGGTTACCTTGCAGAGGTTGCCCCAGATATTAATTTAAAACTTCCCAAGTTTCAGGCCCTTGCCGCAGCAGTTCCCGAGTATGCCCGGCCTTTGGATGATGGTTTATATCGTGCATTAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCTGAGAGAGAGCAGTTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAGGCATGCACACATGCGGCGCAGAACGAGAGGCTACCGATCAGAACAATCTTTCAAGTTCTATTTTTTGAGCAGCTTCAGCTCCGGACTTCCATAGCCGGTTGCTTTCTAGTTTCAGATAATCTGGACGGATCGAGGCAGTTGAGAAGTGGTGTTGTTGGATCTACAGAGGGTGGGTGGGCATCAGCAGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGACAACATGAGGATGAGGGTGTGTGAGCTGGAGAAGGAATGTTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGTTCAAAGGGATCAAGCGCCTGGGGAACAGTTTCTAAGAAACTTGGGTTTAAGATGAAGTCTCAGATGTGTAGTGCGCAAGAAGGGTCAGTTAGCAACCAGAACAATGCAAATAATAAGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAAAACTTCTTCTATTAGTGACAAAGCATCAGTTTCTTCAATTGTTCATTCATAA 1932 0.4457 MACVKLGSKTDAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERRIAEVSESEEECVISLSDIPGGAKTFELVAKFCYGVKLELTSSNVVYLWCAAELLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDVSEHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVSNLSLPLYKRLIAIMESRGIRQEIIAGSLAFYAKTYLPMLNRRQVSGESSTRLAQVAMGSPLSEDDQKILLEEIDGLLSMQKGLVQTKFLFGLLRTAMILRVSPSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVECVQRILDHFLAMDQVTGCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRALDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRTIFQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGVVGSTEGGWASAVKENQVLKVGMDNMRMRVCELEKECSNMRQEIEKLGRSKGSSAWGTVSKKLGFKMKSQMCSAQEGSVSNQNNANNKVEKLKERHVKHKKTSSISDKASVSSIVHS 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02570 643 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Phco7g02570 643 SMART BTB_4 28 133 IPR000210 GO:0005515
Phco7g02570 643 PANTHER OS12G0117600 PROTEIN 22 599 IPR043454 -
Phco7g02570 643 CDD BTB_POZ_NPY3-like 19 122 - -
Phco7g02570 643 SUPERFAMILY POZ domain 16 114 IPR011333 -
Phco7g02570 643 Gene3D Potassium Channel Kv1.1; Chain A 14 141 IPR011333 -
Phco7g02570 643 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Phco7g02570 643 Coils Coil 608 628 - -
Phco7g02570 643 Pfam NPH3 family 213 478 IPR027356 -
Phco7g02570 643 MobiDBLite consensus disorder prediction 600 643 - -
Phco7g02570 643 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02570 Phco-Chr7 44550161 44553363 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02570 7 44550161 44553363 Phco7g02570 7 44550161 44553363 ECH