LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco7g02533	ATGATGACTTGTGTGCCTATAAAAACTAAACCAAAGGAAGACAGGAATATCGAAGAGAAGGTGACTGTGAGTGTGAAGATGTCTGGAGCAGAAGGAGAAGCATACGGAAAGAAGATGACGGAGGAGGAGGAGGTGGTGGCGGAGACTGGTGGAACAGTAGATGCAGAGAGGAAGCCGAAACTGAAAGAGCGAAAGGTATCATGGTCGAAACTGAGGCGAGTAGATTCTCTGAATTTAGAAGCTGGAAGAGTTTCAATGGCTGCACACAATCCTTACGAGATGGGTTGGAGGACAACGTTTTGCTTAGCATTTCAAAGCATAGGGGTTGTGTACGGTGATATTGGTACATCACCCCTTTACGTCTTTTCCAGCACCTTCACCAATGGAATCAAGCATGAGGATGATGTTCTTGGTGTCTTGTCCCTCATCATCTACACCATCATCCTCATACCTTTCCTCAAATACGTCTTCATCGTACTCTGGGCCAACGATAATGGCAACGGTGGAGCTTTTGCACTCTATTCGTTGATATGTAGACATATGAAGATGAGTTTGATTCCAAATGAACAACCAGAGGACAGGGAGCTCTCTAACTACAAACTCCAAACCCCGTCCAGTGAGGTAAAATGGGTCGACAAATTGAAGCAGAAGCTTGAAGGTAGTCTTGTTTCACGAGTTGCGCTTCTGTTTCTTGCCATAATGGGAACTTCCATGGTCATAGGAGACGGGATTCTTACTCCATCAATCTCAGTACTTTCAGCAGTAAGTGGGATCAGTAAATCCTTAGGTCAAGATGCTGTTGTGGGAATCACAGTAGCAGTTTTGATAATCTTATTTTCTGCACAACGATTCGGTACCGATAAAGTGGGATTCACATTCGCTCCAATAATTTTGGTGTGGTTTTTTTTTATCGGTGGAATTGGGCTTTACAATTTATTCAAATATGATATCAAAGTATTACGTGCCTTTTATCCAAAATATATATTTGATTATTTCAAACGAAATGGCAAGGATGGATGGTTATCGCTTGGTGGAGCTTTTCTCTGCATAACAGGATCTGAAGCCATGTTTGCTGACTTGGGTCACTTTGATGTAAGATCCATTCAAATTAGCTTTTCTTGCATTACATGTCCAGCAATAGTGGTTGCATACATCGGTCAAGCAGCATATCTACGGAAGTTCCCTCAGGATGTGGCTAATACTTTCTATGCTTGTGTTCCACATCCCTTGTATTGGCCAACATTTGTTGTGGCTGTTGTTGCTTCCATTATAGCTAGCCAAGCAATGATTTCAGGAGCATTCTCTATTATATCTCAGGCCCTAAGTCTAGGTTGTTTCCCAAGAGTTAAGGTGGTGCACACTTCTATCAAACATCAGGGTCAAGTTTATATTCCTGAGATCAACTACATGTTCATGTTTGCATGTATTTTGGTATGTGTTGCCTTCAAGACCACAGAGAAGATTAGTCATGCATATGGGATTGCAGTGATTGGTGATATGATGATCACAACAACTCTAGTTTCACTGATAATGCTTGTTTTATGGAAAAAGAGTCTCTGGCGAGTGGCTTTGTTCTTCTTAGGATTCGGTTTCATTGAGATAGTTTATTTCTCATCTCAACTAACCAAATTCACAGGAGGAGGATATCTTCCAATTGTATTAGCTCTGTTCTTGACGATGGTGATGGGAATCTGGCATTATGTGCATAAAGAAAGATACATGTTTGAATTAAAAAACAAGATATCGAATGCTTATTTGAATGAAGTGGCAAACAACCCAAACGTAAGACGAGTTCCAGGAATCGGACTTATGTATTCTGAGCTGGTGCAAGGCATTCCTCCCATATTCTCACACCTCATAGGTAGCATTCCGTCCATCCACTCAATTGTTGTGTTTGTGTCCATTAAGGCTATTTTGGTGAGCAATGTTGCATCGGAGGAGAGGTTCTTGTTTCGACAAGTGGGCCCAAGAGAGTACAAAGTATTTCGGTGTGTTGTGAGGCATGGTTACAATGACGTGCTTGAGGATCTTGCAGAGTTTGAGTCACAATTGATACAAAGTCTGAAGGCATACGTTCAGGAAGAGAACTACTCTATGGCGGAGGTGGAGGTAAGTGAAAGTGCAACTGAACAAGCAACAGTGGTTGAGAGTAGTGATAAGAGGGAAGCACATCATTCCTCCAACAAAATAAACCAAAATCAATCAACATCGGCCTCATCCAACTCCATTCAGTCATTGGGAGGGAGTACCGCCAAGTCATCTTCTAACTTGCTTGCCCCACCCATCCATGGAGCTGAAGAGGAACTCAAATTCATAAACAGAGCATTGGAGAAAGGTGTAGTGTATATGCTAGCAGAAGCAGAGGTTGTGGCTCACCCAAACTCCTCCATCTTCAATAAAATCGTTGTGAATTATGTATACAGTTTCTTCCGAAAGAACTTCAGACAAGGTCAGGATTCCATAGTAATCCCACGCAAGAGACTTCTCAAGGTTGGAATGACATACGAGTTATAG	2514	0.4204	MMTCVPIKTKPKEDRNIEEKVTVSVKMSGAEGEAYGKKMTEEEEVVAETGGTVDAERKPKLKERKVSWSKLRRVDSLNLEAGRVSMAAHNPYEMGWRTTFCLAFQSIGVVYGDIGTSPLYVFSSTFTNGIKHEDDVLGVLSLIIYTIILIPFLKYVFIVLWANDNGNGGAFALYSLICRHMKMSLIPNEQPEDRELSNYKLQTPSSEVKWVDKLKQKLEGSLVSRVALLFLAIMGTSMVIGDGILTPSISVLSAVSGISKSLGQDAVVGITVAVLIILFSAQRFGTDKVGFTFAPIILVWFFFIGGIGLYNLFKYDIKVLRAFYPKYIFDYFKRNGKDGWLSLGGAFLCITGSEAMFADLGHFDVRSIQISFSCITCPAIVVAYIGQAAYLRKFPQDVANTFYACVPHPLYWPTFVVAVVASIIASQAMISGAFSIISQALSLGCFPRVKVVHTSIKHQGQVYIPEINYMFMFACILVCVAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVLWKKSLWRVALFFLGFGFIEIVYFSSQLTKFTGGGYLPIVLALFLTMVMGIWHYVHKERYMFELKNKISNAYLNEVANNPNVRRVPGIGLMYSELVQGIPPIFSHLIGSIPSIHSIVVFVSIKAILVSNVASEERFLFRQVGPREYKVFRCVVRHGYNDVLEDLAEFESQLIQSLKAYVQEENYSMAEVEVSESATEQATVVESSDKREAHHSSNKINQNQSTSASSNSIQSLGGSTAKSSSNLLAPPIHGAEEELKFINRALEKGVVYMLAEAEVVAHPNSSIFNKIVVNYVYSFFRKNFRQGQDSIVIPRKRLLKVGMTYEL	837

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco7g02533	837	NCBIfam	potassium uptake protein	102	836	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco7g02533	837	MobiDBLite	consensus disorder prediction	708	758	-	-
	Phco7g02533	837	MobiDBLite	consensus disorder prediction	728	757	-	-
	Phco7g02533	837	Pfam	K+ potassium transporter	103	672	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco7g02533	837	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	95	836	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Phco7g02533	837	MobiDBLite	consensus disorder prediction	35	52	-	-
	Phco7g02533	837	MobiDBLite	consensus disorder prediction	32	52	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco7g02533	Phco-Chr7	44152901	44158445	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phco7g02533	7	44152901	44158445	Phco7g02533	7	44152901	44158445	ECH