Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02504 ATGGCTGGAACACTTCCAGGAGTTGAATGTGCAAGAAGGAGAAGATTCCATAGATGCTCGGATTCAAACTCAACTTCTTTAGCTTCACATGTATGCACAAGGCGCTCTTCTTTTGGTCTGTATGCAAGTAACCATGGACACTGTCTTTCTTTGTCCACTTCACAGCAAAGAGGCATGTTATACCAGACACACCCAGATGAGGATATGGTAGGAGCAGCCAGAGAAGCCAGACAGAGATTGGATGACAAGTTTAGAGCACAAAGGATTTCAGATAACAAAAGGCAAAACAGTACAACATGTGTGGAGGGCGCAAGAACAAGGATAACAGAGTTGCAGACAGAGGTGTATGGGTCAAAGAAAAGTGGTGCAAGGAAATTCAGTTGGACTAGATGGAGCTGGAAGGCCTCTGAACAAGAGGACTGTGCCGTGTGCTTGGAATCATTCAGGGTTGGAGAGACACTGATCCATCTTCCTTGTGCACATAAGTTCCATGACAGATGCTTGAAACCATGGTTGGAAAATAATTCTCATTGTCCATGTTGCAGAACAACCATTCTTTCCCTCTAG 567 0.4462 MAGTLPGVECARRRRFHRCSDSNSTSLASHVCTRRSSFGLYASNHGHCLSLSTSQQRGMLYQTHPDEDMVGAAREARQRLDDKFRAQRISDNKRQNSTTCVEGARTRITELQTEVYGSKKSGARKFSWTRWSWKASEQEDCAVCLESFRVGETLIHLPCAHKFHDRCLKPWLENNSHCPCCRTTILSL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02504 188 Pfam Ring finger domain 140 182 IPR001841 -
Phco7g02504 188 PANTHER SI:CH211-59O9.10 61 186 - -
Phco7g02504 188 CDD RING-H2_PA-TM-RING 140 182 - -
Phco7g02504 188 SUPERFAMILY RING/U-box 128 186 - -
Phco7g02504 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 187 IPR013083 -
Phco7g02504 188 FunFam Zinc finger family protein 115 187 - -
Phco7g02504 188 ProSiteProfiles Zinc finger RING-type profile. 141 182 IPR001841 -
Phco7g02504 188 SMART ring_2 141 181 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02504 Phco-Chr7 43865405 43866905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02504 7 43865405 43866905 Phco7g02504 7 43865405 43866905 ECH