Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02388 ATGTTTCCAAATTGTGGTCATCCAGTGACACTGCTTCTTGTCTTCTTAACGGTGGTTTACACTGGCTCTGCTTGGGTTGGCGTGAACTGGGGAACCATGGCAACCCACCAACTTCCACCCGAGAAGGTGGTGAAGATGCTCAAGGAAAATGGGTTCACCAAATTGAAGCTCTTTGATGCGGATGAACTGATTATGGCAGCTCTTACGGGGACCGATATCCATGTCATGGTTGCCATACCCAACAACATGCTGGAAAAGATAAGTAACAGTCCTAAAGCTGCAGATTCTTGGGTCTATGATAATGTCATCACTTACTTGTTCACTGGTGGCGTAAAAATCAAGCACGTTGCTGTGGGTAATGAGCCTTTCCTTAAAGCATATAATGGTACCTTTGCGAAGAAAACGCTGCCAGCCCTAAAGAATATACAGACATCACTTAATAAGGCCGGGTTGAGTTCCAAGGTCAAAATCACTGTTCCATTCAATGCTGATATTTACTATTCACCTGATTCAAATCCATTGCCATCAGCTGGTGACTTCAGGCCTGAAATGAGAGACCTTACTATTGAGATAATCCAATTCTTGTATGCAAACAATGCACCTTTTACAGTTAATATCTACCCTTTTCTTAGTCTTTATGGCAACGAAGATTTCCCTTTTGATTTTGCATTTTTTGATGGAAAAAGCAAGCCTCTTAGGGACGGCAAGGCACTTTACACCAATGTGTTTGATGCAAATCTTGACACTCTTCTGTGGGCTTTAGACAAAGCAGGATATCCTGACATGAAGGTTATAATTGGGGAAATTGGGTGGCCAACAGATGGTGATAAGAATGCTAATGCCAAGAGTGCAAGGAGGTTCAACTTTGGTTTGCTTAAACATGCTCTGAGTGGCAAGGGTACCCCTAAAAGGAGAGGCACAATTGACTTGTACTTATTCAGCCTCATTGATGAGAACATTAAAAGTGTTGCTCCTGGGAACTTTGAGAGGCATTGGGGGGTTTTTGAGTTTGATGGCAAGCCAAAGTACGAATTAGACTTAACAGGTGAGCACAAGGAAAAGGGCCTTATCCCTGTGGAAGGTATAAAGTACCTGCAAAAGAGATGGTGTATTTTGAATCCAGATGTTACTAACTTTGATGATTTGGCTGGTAGCATTGACTATGCTTGTACCTTTTCTGACTGCACTTCACTTGGCTATGGCTCTACTTGTAATTATCTTAGTGTCCAAGGGAATGCATCTTATGCCTTCAATATGTATTATCAAGTAAATAACCAACAGGATTGGAGCTGTGATTTCTCTAGTTTGGCTACCATAACACACAAGGATCCATCAGAGAGTGGCTGCCAATTTCCTGTGATGATAGCTCGCAGTTCATCTTTGCTGCTACATCAAGGACTCCTAGACATCCTGAAGAAAACATTGGAGGTTTATATTTTTGTCATCATTTTGTTATAG 1458 0.4184 MFPNCGHPVTLLLVFLTVVYTGSAWVGVNWGTMATHQLPPEKVVKMLKENGFTKLKLFDADELIMAALTGTDIHVMVAIPNNMLEKISNSPKAADSWVYDNVITYLFTGGVKIKHVAVGNEPFLKAYNGTFAKKTLPALKNIQTSLNKAGLSSKVKITVPFNADIYYSPDSNPLPSAGDFRPEMRDLTIEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFFDGKSKPLRDGKALYTNVFDANLDTLLWALDKAGYPDMKVIIGEIGWPTDGDKNANAKSARRFNFGLLKHALSGKGTPKRRGTIDLYLFSLIDENIKSVAPGNFERHWGVFEFDGKPKYELDLTGEHKEKGLIPVEGIKYLQKRWCILNPDVTNFDDLAGSIDYACTFSDCTSLGYGSTCNYLSVQGNASYAFNMYYQVNNQQDWSCDFSSLATITHKDPSESGCQFPVMIARSSSLLLHQGLLDILKKTLEVYIFVIILL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02388 485 FunFam Glucan endo-1,3-beta-glucosidase 8 364 460 - -
Phco7g02388 485 Pfam X8 domain 369 438 IPR012946 -
Phco7g02388 485 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Phco7g02388 485 FunFam Glucan endo-1,3-beta-glucosidase 5 25 353 - -
Phco7g02388 485 Gene3D - 364 459 - -
Phco7g02388 485 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 15 440 IPR044965 GO:0004553|GO:0005975
Phco7g02388 485 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Phco7g02388 485 SMART X8_cls 368 451 IPR012946 -
Phco7g02388 485 Gene3D Glycosidases 25 355 - -
Phco7g02388 485 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02388 Phco-Chr7 41777684 41779809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02388 7 41777684 41779809 Phco7g02388 7 41777684 41779809 ECH