Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02386 ATGGAAATAAGAAGTTTGAAAGAGAAGAGAGGGAGGGCCAGCAAGAAGCAGAAGGAGAGAGAGATTGGAACGGGAAAACCAAGTGCGTTTCTCTCTTCCTTCGCCACCCCCACTTCTACCCGTTTCACCTCTACCCTCTCTTCTTTTCTCCGTTTCATTCATCAAGGCGTAGGAGTATTCACGATGGTTGCAACAGCCGTAACGGCGTCGTTTATCCCTGTTGTGTCTTCGCTGGGCTCTGGAAAAGGGGAGCAGACGCAATTGGGTGGTCGCTCTGCGAACCTGAGAGGTCTCCATCGGAGAAATGGTTTATGCGGTGGCTTGCAGGTGAAGGCAAACGCGCAGGCCCCTCCGAAGGTTAACGACATCGTGAAGGTTGAGGATGATTTGCCATCGTCGTCGTCACTTTCTCATGCTCCGAGGACTTTCATCAACCAGTTACCGGACTGGAGCATGCTTCTCGCCGCCATCACCACAGTCTTCTTAGCCGCGGAGAAGCAGTGGATGATGCTCGATTGGAAGCCGCGCCGCCCCGACATGCTCGTTGACCCCTTTGGGATTGGAAAGATCGTGGAGGACGGGCTTGTGTTCAGGCAGAACTTCTCAATTCGGTCCTACGAAATTGGTGCCGATAAAACCGCGTCTATAGAGACCTTGATGAATCATTTGCAGGAGACAGCACTTAATCATGTTAAGACAGCGGGGCTTCTTGGTGATGGTTTCGGCTCCACGCCTGAAATGTGTAAAAAGAACTTGATTTGGGTGGTTACCAAGATGCAGGTTGTGGTTGATCGGTATCCTAAATGGGGTGAAGTTGTTCAAGTCGACACTTGGGTTTCCGCATCAGGGAAGAATGGTATGCGTCGTGATTGGCTTGTACGTGATGCCCAAACGGGTGAAATCTTGACAAGAGCCACCAGTGTTTGGGTCATGATGAATAAAGAGACAAGGAAACTGTCTAAAATTCCCGAAGAAGTCAGGGGAGAGATAGGCACTTATTTTGTGGATTCTGCTCCAGTTGTGGAAGAGGATAAAAGAAAACTATCCAAAATTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCTAGATGGAGTGATCTAGATGTTAACCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTTTGGAGAGTCATGAGTTGTGTGCCATGACTTTGGAGTACAGAAGGGAGTGTGGCAGGAAGAGTGTGCTGGATTCCCTGACTGATATATCTGGTGCTAATGTAGGCAGTTTAGCTGAAGGTGGACTTTTTGAGTGCAAACACTTGCTTCGACTTGAAGATGGTGCTGAAATTGTGAGGGGTAGGACTGAATGGAGGCCAAAATCTGCAAACAACTTTGTTAGTCAGGTTCCAGCAGAAAGCACCTGA 1422 0.4845 MEIRSLKEKRGRASKKQKEREIGTGKPSAFLSSFATPTSTRFTSTLSSFLRFIHQGVGVFTMVATAVTASFIPVVSSLGSGKGEQTQLGGRSANLRGLHRRNGLCGGLQVKANAQAPPKVNDIVKVEDDLPSSSSLSHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVEDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDRYPKWGEVVQVDTWVSASGKNGMRRDWLVRDAQTGEILTRATSVWVMMNKETRKLSKIPEEVRGEIGTYFVDSAPVVEEDKRKLSKIDDSANFIRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPLLESHELCAMTLEYRRECGRKSVLDSLTDISGANVGSLAEGGLFECKHLLRLEDGAEIVRGRTEWRPKSANNFVSQVPAEST 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02386 473 Pfam Acyl-ACP thioesterase 194 457 IPR002864 GO:0006633|GO:0016790
Phco7g02386 473 Pfam Acyl-ATP thioesterase 62 183 IPR021113 GO:0016790
Phco7g02386 473 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 109 461 IPR045023 GO:0006633|GO:0016297
Phco7g02386 473 Gene3D Hotdog Thioesterase 187 463 - -
Phco7g02386 473 CDD 4HBT 197 313 - -
Phco7g02386 473 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 355 456 IPR029069 -
Phco7g02386 473 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g02386 473 FunFam Acyl-[acyl-carrier-protein] hydrolase 188 462 - -
Phco7g02386 473 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 191 343 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02386 Phco-Chr7 41744701 41748622 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02386 7 41744701 41748622 Phco7g02386 7 41744701 41748622 ECH