Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02338 ATGGCTCCAAAAACTGGGAAAACCAAACCACACAAGGCCAAGGGAGAGAAGAAGAAAAAAGAAGAGAAAGTTTTGCCAACCGTCGTCGAAATTACAGTCGAAACACCCGACGAATCACAGGTTACTCTCAAGGGCATCTCCACGGATAGGATCCTAGATGTGAGAAAGCTTTTAGCGGTACACATTGAGACTTGTTCCTTGACCAATTTTTCCTTGTCTCATGAGGTGCGAGGCGCGAGACTGAAAGACACTGTCGAGATCGTTTCCTTGAAACCCTGCCATCTGACCATCGTCCAAGAGGACTACACAGAAGAGCTTGCCGTCGCACACATTCGGCGACTCCTTGATATCGTGGCCTGCACTACCTCCTTTTCCTCCGCCACAAAACCTCCCGCCTGCAAGTCTAAAGACCCCACCGAACCGGGTTCAGAAAATGGATCGGAAACAAGCCCGAGACTCAAACCCGTGGATCCGAATTCGGACTCGGGCAATGCCAAAACCGACAAAATGGATGGTGACATCTCCATGTGTCCACCTCCCAGGCTCGGACAGTTCTACGATTTCTTTTCGTTTCCGCACCTTACGCCGCCGTTTCAGTACATACGGAAATCAAATCGACCTTTCCTTGAGGATAAAACAGAAGATGATTTCTTTCAGATTGATGTTAGAGTTTGTAGTGGAAAACCTACTACAATTGTTGCCTCTAGAATAGGATTCTATCCTGCTGGAAAACATCCACTTGTGAGTCATACATTGGTGGGTCTGCTTCAGCAGATAAGCAGGGTTTTTGATGCTGCTTACAAGGCACTTATGAAGGCGTTCACCGAACACAATAAGTTTGGCAATCTTCCTTATGGTTTTCGTGAAAACACATGGGTTGTTCCTCCGGTTGTTTCTGATAATCCATCCGTCTTTCCACCACTTCCCACGGAAGATGAAACTTGGGGAGGAAATGGGGGTGGACAGGGCAGAGATGGTAATCTCAAAAATAGACAGTGGGCCAGAGACTTTGCAATTCTAGCTGCAATGCCATGTCAAACTGCAGAAGAGAGACAGATTCGAGATAGGAAAGCTTTTCTACTTCATAGTTTATTCGTTGATGTATCAGTCTTCAAAGCTGTTTCTGCAATAAACCATTTAGTGGATACTAAGCAAAACTCTTCTTTGCCAACTTCCTCTGAAGAAAGAAATGGAGATTTAACTATTAAAGTGACAAGAGATGTATCCGATGCAAGTTTGAAGTTGGACTGCAAAAATGATGGAAATCGAGTTCTTGGATTGTCTGAAGAAGAACTAGCTCAGAGAAACCTTCTCAAAGGCATAACTGCTGATGAAAGTGCAACTGTTCATGATACTCCTACTTTAGGTGCAGTACTTATAAAACACTGTGGCTACACAGCCGTGGTAAAGGTCTCAGCTGACAGAGATTTGGAGGGGAGTCCCAATTCCTTGGAAATTGATATTGAGGAGCAGCCTGAAGGAGGTGCAAACGCATTGAATGTTAACAGCTTAAGGATGCTATTGCATAGGCCATCTACACTCCAATCATCAAATGCAATTCAACGAATCCAGGGCACAGAAATTGAATATTCACGTTCATCTCAGTCATTGGTAAGGAAAGTCCTAGAGGAAAGTTTACTAAAATTGAAGGAAGAGACCACTAGACACAGTAAATCTATCAGATGGGAGCTTGGGGCATGTTGGCTACAACATTTACAAAATCAGGCTACTGGGAAAACTGAGCCAAAAAAGGCCGAAGAGGCTAAAGTTGAACCGGCTGTTAAAGGTCTTGGGAGGCAAGGTGGATTACTAAAGGAATTAAAGAAAAAGATTGATAACAAAAACTCCAAAGTTGAAGTAGGAAAGGATATTTCCCCATCTAATAATGGCAATGAGATAAACAAGCAAGAAGCCACTAAACAAGAATTAGAGAGACAAGGTGAAGAAAAAGAAACTATATGGAGAAAGCTACTTTCTGATGGTGCATTTACACGCCTTAAAGAATCTAAAACTGATCTTCATCTGAAGTCACCTGATGAATTGATGGACATGGCACATAAATATTATGTTGATACTGCACTTCCAAAGCTGGTGGCAGATTTTGCGTCCCTCGAACTCTCACCTGTGGATGGAAGGACGTTGACTGATTTCATGCATACGAGGGGCTTGCAAATGTCTTCCTTGGGCCAAGTGGTTGAGCTTGCAGATAAACTTCCTCATGTTCAATCTCTATGTATACACGAGATGGTTGTTCGAGCCTACAAGCATATCTTACAAGCAGTTGTTGCTGCAGTTGATAATGTTTCTGAGTTGGCTTCATCTATAGCATCATGCCTAAATATTTTGTTGGGAACACCAACATCTGAAACTAGTGAGGAAGATATTATTACTAGTTATGAACTGAAATGGAAATGGGTAGAAAACTTCCTTCTGAAGAGGTTTGGATGGCAATGGAAGGATGAAAATGGTCAAGATTTAAGAAAGTTTGCCATTCTTCGGGGACTCTGCCATAAGGTGGGGCTTGAACTGGTTCCTAGGGACTATGATATAGATACATCATGTCCTTTTAGAAAGACGGATATTGTAAGCATGGTCCCCATATATAAGCATGTAGCTTGTTCATCTGCTGATGGCCGCACACTTCTGGAATCATCCAAGACGTCCTTGGATAAAGGTAAATTGGAGGATGCTGTCAATTATGGCACAAAGGCACTCTCAAAATTAGTGTCGGTATGTGGGCCTTACCATAGAATGACAGCAGGAGCATATAGCCTCTTGGCTGTTGTGCTGTACCATACTGGAGATTTCAATCAGGCAACTATCTATCAGCAAAAGGCACTAGATATTAACGAAAGAGAGCTTGGACTGGACCATCCTGATACGATGAAAAGTTATGGGGATCTTGCTGTTTTCTATTATCGACTCCAACATACAGAGTTGGCTTTAAAGTATGTTAATCGTGCTTTGTATCTTCTGCACTTAACTTGCGGACCTTCACATCCAAACACTGCTGCCACCTACATTAACGTAGCGATGATGGAAGAAGGATTGGGGAATGTCCATGTTGCTCTCAGATACCTTCATGAGGCTTTAAAATGTAACAAAAGATTACTTGGAGCTGATCATATTCAGACGGCTGCAAGCTATCACGCAATAGCTATTGCTCTTTCTTTGATGGAAGCATATTCTCTAAGTGTTCAGCATGAACAGACCACCCTCCAGATCCTGCAGGCTAAACTTGGTTCTGATGATCTAAGGACACAGGATGCAGCTGCATGGCTGGAATACTTCGAGTCAAAGGCTCTGGAGCAACAGGAGGCTGCGCGAAATGGTACACCTAAGCCAGATGCCTCAATCTCCAGCAAAGGTCATTTAAGTGTGTCAGACCTCTTGGACTACATAACACCGGATGCTGATCAGAAAGCACGGGAAGCACAGAAAAAGGCTCGTGCCAAGTTAAAGGGAAAACCAGGCCAAAACTGGGAAACAGCTTCAGATGAAAATCAAAAGGATGAAGACATGTCTAAAGGTTATTCAATTACAGAGACTACCAGTGATAAAGAAAATAAATCTGAAGCTCAAATTAAAGACAATGGGATTGATAAAGTGGAGTCCACTCACATAGACCTAACGATGCTCAATGAAAGTAATAATAACCTAGCACAGGATGACAGCTCAGATGAAGGATGGCAGGAAGCTGTTCCCAAAAGCCGGTCACTCGTTGGGCGCAAGTCATCTTCATCTAGAAGGCCCACCCTAGCAAAACTAAACACTAACTTCATGAATGTTTCTCAATCAAGATATCGGAGCAAGCCTACTAATTTCTCTTCTCCAAGAACAAATTTAAATGAGACCATTGTCGGACCATCCCCTTCTGTTCCAAAAAAGTTTGTTAAGAGTGCAAGCTTCAGTCCAAAGCTGAATAGCGGTAATGCCCCCAATGGTGGAGCAGAGAAGTTAACAGACTCTAAGTCAGCTCCAGCCACCCCTGCTCCAAGTGATCAAATTGCTAAACCAGCTCCTTCTAGCACTGGTGTCGGTGTTCAATCAGCAGGTAAACTTTATTCCTACAAAGAAGTAGCCTTAGCCCCACCTGGGACAATTGTGAAGGCAGTGGCTGAACAGTCACCAAAAGGAAATCCTATCCAACAAAATTCTGAGATTAGTGCCATGATAGTTACAATGAAGGAGACTCAAAATATTGTGGCAACGAATGATGTGGAAGATTTTGCTCAGAAATCAATTGATGAGAAAATACAAATCCCTGTCCATGAAGAACAAAAAGAAAGGGAAACTACTGTGGTGAACGGTAATAGAGAAACAGTAAATAGTAATGCCGACGACGAGATTGCTCTTAAAATCAAGGAAGCTAGCATTGTTTCCGTTATAGAGAAGAAAATTGAAGTTGGAAACATCACAGTTGTCGAGATTGAGAATTCTGGTTGCTTAGATAACATAAACAACAGTGCCTCTACAGGTGAATCAGAGGTACTGGTGCAAGAAAGTTCTGAAGCAACTTCCCACAATTCAAATCCCCTGACCATTTTAGTTGAAGACGAGAAACAGTTACTTGACAATGATTCCTGTGCGTCGATTGATACGGGTAACGAGGGAGATGAGAAACATGAATCATCTAGCCACAATGCAGTCTGTAAGTCACTACCATTAGAAGGAGAAAAACAAGAAACAGAAACAGAAACAGGAAAGGAACCAACCAAGAAACTTTCTGCAGCTGCACCACCCTTTAATCCATCCACAATTCCAGTTTTTGGCTCTGTTCCTGTTCCAGGTTTCAAAGATCATGGAGGTATTTTGCCCCCACCAGTAAATATTGCTCCTTTGCTTCCAGTCAGTCCCCGAAGATCACCGCATCAGTCAGCTACGGCAAGGGTTCCATATGGTCCACGAATATCTGGTGGCTATAACAGATATGGGAACCGTGTTCCGCGCAATAAAACTGTATTCCTCTCAGGTGAACCCTCCCCTGATGGTAACCCCAACAGTCCTCCTAGAATAATGAATCCACATGCCACAGAGTTTGTACCTGGACAACATTGGGTATCTAATGGTTATGTTGTTCCTCCTAACGGATATATGACTTCTCCAAATGTCATTCCAGGGTCTCCTAATACTTTCTCCCCGGTGTCTCACAATGGTATGCCAGTGTCACCTAGTGGATATCCTGCTTCTCTAAATGGTACCCAAGTCGATCAATATGGGTCTGTACCATCTCCAACCATTTCAACTGATACATCGCAAGTTGTGTCTGATGAAACTGATATTGAAAACAAAAGTCAAACTCTGGATGGGGAAAGTAAAAATTCTTTTCCAACAGATGTAAGTTCTGAAAAGGAGCATGGTGAACAAAATCCTCAAGAAGAACTATCTGCCAGCAGTGAAAACTCTACTACTAAAGTAGAAGAAAAGCAGGCAGATCTCAGCCCCCCATCTGATTTTAGTAACGAAGATAAAGTAATCAAGAAGGATGAAGTGGATCAGAAAAAGCAAAGCAAGTGTTGGGGTGATTACAGTGACAGCGAAGCTGATATGATTGAGGTCACAAGCTAA 5568 0.4282 MAPKTGKTKPHKAKGEKKKKEEKVLPTVVEITVETPDESQVTLKGISTDRILDVRKLLAVHIETCSLTNFSLSHEVRGARLKDTVEIVSLKPCHLTIVQEDYTEELAVAHIRRLLDIVACTTSFSSATKPPACKSKDPTEPGSENGSETSPRLKPVDPNSDSGNAKTDKMDGDISMCPPPRLGQFYDFFSFPHLTPPFQYIRKSNRPFLEDKTEDDFFQIDVRVCSGKPTTIVASRIGFYPAGKHPLVSHTLVGLLQQISRVFDAAYKALMKAFTEHNKFGNLPYGFRENTWVVPPVVSDNPSVFPPLPTEDETWGGNGGGQGRDGNLKNRQWARDFAILAAMPCQTAEERQIRDRKAFLLHSLFVDVSVFKAVSAINHLVDTKQNSSLPTSSEERNGDLTIKVTRDVSDASLKLDCKNDGNRVLGLSEEELAQRNLLKGITADESATVHDTPTLGAVLIKHCGYTAVVKVSADRDLEGSPNSLEIDIEEQPEGGANALNVNSLRMLLHRPSTLQSSNAIQRIQGTEIEYSRSSQSLVRKVLEESLLKLKEETTRHSKSIRWELGACWLQHLQNQATGKTEPKKAEEAKVEPAVKGLGRQGGLLKELKKKIDNKNSKVEVGKDISPSNNGNEINKQEATKQELERQGEEKETIWRKLLSDGAFTRLKESKTDLHLKSPDELMDMAHKYYVDTALPKLVADFASLELSPVDGRTLTDFMHTRGLQMSSLGQVVELADKLPHVQSLCIHEMVVRAYKHILQAVVAAVDNVSELASSIASCLNILLGTPTSETSEEDIITSYELKWKWVENFLLKRFGWQWKDENGQDLRKFAILRGLCHKVGLELVPRDYDIDTSCPFRKTDIVSMVPIYKHVACSSADGRTLLESSKTSLDKGKLEDAVNYGTKALSKLVSVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSDDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPDADQKAREAQKKARAKLKGKPGQNWETASDENQKDEDMSKGYSITETTSDKENKSEAQIKDNGIDKVESTHIDLTMLNESNNNLAQDDSSDEGWQEAVPKSRSLVGRKSSSSRRPTLAKLNTNFMNVSQSRYRSKPTNFSSPRTNLNETIVGPSPSVPKKFVKSASFSPKLNSGNAPNGGAEKLTDSKSAPATPAPSDQIAKPAPSSTGVGVQSAGKLYSYKEVALAPPGTIVKAVAEQSPKGNPIQQNSEISAMIVTMKETQNIVATNDVEDFAQKSIDEKIQIPVHEEQKERETTVVNGNRETVNSNADDEIALKIKEASIVSVIEKKIEVGNITVVEIENSGCLDNINNSASTGESEVLVQESSEATSHNSNPLTILVEDEKQLLDNDSCASIDTGNEGDEKHESSSHNAVCKSLPLEGEKQETETETGKEPTKKLSAAAPPFNPSTIPVFGSVPVPGFKDHGGILPPPVNIAPLLPVSPRRSPHQSATARVPYGPRISGGYNRYGNRVPRNKTVFLSGEPSPDGNPNSPPRIMNPHATEFVPGQHWVSNGYVVPPNGYMTSPNVIPGSPNTFSPVSHNGMPVSPSGYPASLNGTQVDQYGSVPSPTISTDTSQVVSDETDIENKSQTLDGESKNSFPTDVSSEKEHGEQNPQEELSASSENSTTKVEEKQADLSPPSDFSNEDKVIKKDEVDQKKQSKCWGDYSDSEADMIEVTS 1855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02338 1855 MobiDBLite consensus disorder prediction 620 636 - -
Phco7g02338 1855 Gene3D Tetratricopeptide repeat domain 874 1126 IPR011990 GO:0005515
Phco7g02338 1855 CDD CLU-central 708 849 IPR033646 -
Phco7g02338 1855 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 7 1756 IPR027523 GO:0006996
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1619 1648 - -
Phco7g02338 1855 Coils Coil 633 653 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1494 1513 - -
Phco7g02338 1855 Pfam Tetratricopeptide repeat 919 989 - -
Phco7g02338 1855 Pfam Tetratricopeptide repeat 1003 1077 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 125 174 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1302 1318 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1821 1842 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1139 1201 - -
Phco7g02338 1855 SMART tpr_5 962 995 IPR019734 GO:0005515
Phco7g02338 1855 SMART tpr_5 920 953 IPR019734 GO:0005515
Phco7g02338 1855 SMART tpr_5 1004 1037 IPR019734 GO:0005515
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1792 1817 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1326 1348 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 140 165 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1710 1761 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1240 1288 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1557 1571 - -
Phco7g02338 1855 Pfam Translation initiation factor eIF3 subunit 135 706 849 IPR033646 -
Phco7g02338 1855 ProSiteProfiles TPR repeat profile. 920 953 IPR019734 GO:0005515
Phco7g02338 1855 ProSiteProfiles Clueless (Clu) domain profile. 311 583 IPR025697 -
Phco7g02338 1855 Pfam Mitochondrial function, CLU-N-term 48 118 IPR028275 -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1528 1580 - -
Phco7g02338 1855 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 875 1125 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1710 1855 - -
Phco7g02338 1855 SUPERFAMILY TPR-like 886 991 IPR011990 GO:0005515
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1 21 - -
Phco7g02338 1855 SUPERFAMILY TPR-like 957 1075 IPR011990 GO:0005515
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1165 1201 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 619 646 - -
Phco7g02338 1855 MobiDBLite consensus disorder prediction 1218 1348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02338 Phco-Chr7 41052459 41075903 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02338 7 41052459 41075903 Phco7g02338 7 41052459 41075903 ECH