Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02308 ATGGCGGTTCAGAGGATCACTTCCAACGAAGCACAAGCTTCGAAGAATGTTTCGCATGACCATTTCTTCTTATGGAGAGAGTTTGTGTGGGGAGCTGTTGCTGGTGCTTTTGGAGAAGGAGTGATGCATCCAGTAGATACCATTAAAACCCGACTACAAAGTCAAGCTATTCTAAATGGACTTCAGAACCAGAAAAACATATTGCAGATGGTGCAATATGTCTGGAAGGTTGATGGACTAAAAGGCTTTTACAGGGGTGCAATACCTGGTATTACTGGATCTCTTGCAACTGGTGCAACATATTTTGGTGTCATAGAGTCCACAAAAAAGTGGATTGAGGATTCTCATCCTAGCCTTAGGGGCCACTGGGCGAATTTCATTGCTGGAGCCGTTGGAGACACTCTAGGTTCCTTTGTGTATGTTCCATGTGAAGTGATGAAACAGCGCATGCAGGTTCAAGGCACAATTACATCTTGGAGTTCAGTTTCTGTGAAAAATGGCATTGCAATTAATCCTGGCACACAAATGTATGATTATTATACTGGAATGATCCACGCAGGCTGCTCAATATGGAAAACACAGGGCTTAAAGGGTTTATATGCAGGATATTTATCTACTCTGGCAAGGGATGTTCCGTTTGCTGGTCTAATGGTCATGTTCTATGAAGCTTTGAAAGACGTTACAAAATATGTAGAGCAAAAAGGGATATCTAGCCCAAATTGGCGTGTTAACCATTCATTCGAGGGACTGGTTTTAGGAGGATTAGCGGGTGGTCTCAGCGCATATCTTACTACTCCTTTGGATGTTGTTAAAACAAGACTGCAAGTGCAGGGTTCAACTTTGAGGTATAGTGGTTGGTTGGATGCAATTTGCAGTATATGGGCCACAGAAGGCATGAAGGGGATTTTTAGGGGTAGCATCCCCAGGATTACATGGTACATTCCGGCTTCAGCACTTACATTCATGGCTGTGGAATTTCTCAGAGATCATTTTAATGAAAGGGTGTCCAATGATAACTTGCGAGATGTTCGCAGATTATCAGTAGACAAGAAATCACTGCAGGAGGTTGCTTAG 1074 0.4302 MAVQRITSNEAQASKNVSHDHFFLWREFVWGAVAGAFGEGVMHPVDTIKTRLQSQAILNGLQNQKNILQMVQYVWKVDGLKGFYRGAIPGITGSLATGATYFGVIESTKKWIEDSHPSLRGHWANFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTITSWSSVSVKNGIAINPGTQMYDYYTGMIHAGCSIWKTQGLKGLYAGYLSTLARDVPFAGLMVMFYEALKDVTKYVEQKGISSPNWRVNHSFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYSGWLDAICSIWATEGMKGIFRGSIPRITWYIPASALTFMAVEFLRDHFNERVSNDNLRDVRRLSVDKKSLQEVA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02308 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
Phco7g02308 357 FunFam Mitochondrial substrate carrier family protein 7 166 - -
Phco7g02308 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 330 IPR018108 -
Phco7g02308 357 FunFam Mitochondrial substrate carrier family protein 168 347 - -
Phco7g02308 357 Gene3D Mitochondrial carrier domain 3 167 IPR023395 -
Phco7g02308 357 Gene3D Mitochondrial carrier domain 168 347 IPR023395 -
Phco7g02308 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Phco7g02308 357 SUPERFAMILY Mitochondrial carrier 21 327 IPR023395 -
Phco7g02308 357 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Phco7g02308 357 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Phco7g02308 357 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Phco7g02308 357 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Phco7g02308 357 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 9 336 - -
Phco7g02308 357 Pfam Mitochondrial carrier protein 247 333 IPR018108 -
Phco7g02308 357 Pfam Mitochondrial carrier protein 24 114 IPR018108 -
Phco7g02308 357 Pfam Mitochondrial carrier protein 122 227 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02308 Phco-Chr7 40561069 40569374 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02308 7 40561069 40569374 Phco7g02308 7 40561069 40569374 ECH