Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02286 ATGGCTAACTCATCTCACTCAATGGACAACGGTGCCCAAAAGTTGGCCGGAAAAGTTGTCATTATCACCGGAGGAGCTAGCGGCATCGGCGAAGAGACTGCGCGTCTGTTTGCCAACCATGGTGCGCGAATGGTGGTGATTGCTGACATCCAAGATGAACTGGGCAACCAAGTCGCAGCATCCATCGGCTCCGATAGGTGCACCTATGTCCGTTGTGATGTGAGAGAGGAAGAGCAAGTGAAAGAGGTGGTGGATTCAACGGTCAACGGTTATGGCCAATTGGACGTCATGTTCTGCAACGCCGGCATCCTTAGTCCCTCCGACCAGACAATCCTCGACCTCGACTTTTCCCAGTTCGACCGTCTTTTCGCCGTCAATACGAGGGGCATGGCGGCGTGTGTGAAGCACGCCGCGCGCTCGATGGTGGAGCGGCGCGTGAGGGGCAGCATCGTATGCACAACGAGCGTGGCGGCGTCGCACGGCACCATGTTGCGCACGGACTACGCGATGTCAAAGCACGCGGTGAAGGGGCTGGTGCGTTGCGCGAGTGTGCAGCTGGGGGCGCACGGTATCAGGGTGAACTGCGTCTCACCGAGTGGGTTGGTCACACCGTTGACGCGTGCGGCGATGAAGATCGAAGAGCTGCAAAAAGTGTATGCGCAGAGCTCCAGGCTGAAAGGCGTCTTTTTGACTGCCAAACATATTGCGGATGCGGTCCTGTTTCTGGCGTCCGGTGACTCCGAGTTTGTAACCGGACACGATCTTGTGGTGGACGGTAGTTTTGCGGTTTGA 792 0.572 MANSSHSMDNGAQKLAGKVVIITGGASGIGEETARLFANHGARMVVIADIQDELGNQVAASIGSDRCTYVRCDVREEEQVKEVVDSTVNGYGQLDVMFCNAGILSPSDQTILDLDFSQFDRLFAVNTRGMAACVKHAARSMVERRVRGSIVCTTSVAASHGTMLRTDYAMSKHAVKGLVRCASVQLGAHGIRVNCVSPSGLVTPLTRAAMKIEELQKVYAQSSRLKGVFLTAKHIADAVLFLASGDSEFVTGHDLVVDGSFAV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02286 263 Gene3D - 5 262 - -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 168 187 IPR002347 -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 92 103 IPR002347 -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 142 158 IPR002347 -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 19 36 IPR002347 -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 189 206 IPR002347 -
Phco7g02286 263 PRINTS Glucose/ribitol dehydrogenase family signature 225 245 IPR002347 -
Phco7g02286 263 PANTHER SHORT-CHAIN DEHYDROGENASE REDUCTASE 11 262 - -
Phco7g02286 263 Pfam Enoyl-(Acyl carrier protein) reductase 24 259 - -
Phco7g02286 263 FunFam Short-chain dehydrogenase reductase 5 263 - -
Phco7g02286 263 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 17 259 IPR036291 -
Phco7g02286 263 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 155 183 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02286 Phco-Chr7 40230011 40231016 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02286 7 40230011 40231016 Phco7g02286 7 40230011 40231016 ECH