Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02276 ATGAGAACCACTCTCACCGGTTTGCCGTTGGTGTTCCAACAATTCAGAGCTCTGTTGAAGAAGAATCTGTTACTGTCATGGCGGAACAAGAGAGCCACCCTTCTGCAATTGCTCTCCCCTCTCATATTCATTTTCCTCATATTCGCCATCGACAAGGCCATTAAGGCTCAGACATCAACCTCCTCCGCCTACAAGACCGTCACCGACCCTCCCTCCCTCCCCTCTCCTCCCATAACTCCCTGCGAAGACAAGTTCTTCATCAAACTCCCCTGCTACGACTTCGTTTGGAGCGGTGACCAAAGCCCCACCTTCCAAACCATCGTCACCCGCATCATGAACAACAACCCCGGCAGACCCATCCCTCCCTCCAAGGTGAAGTCGTTTAAGGACAAGACCGAGGTGGATGCGTGGCTGTTCAGTAACCCTATGCGTTGTCCGGGGGCGCTTCATTTCTCGCAGCAAAACGGCACCTTTATAAGTTACGGTCTTCAGACCAACTCCACCAGTCTTCAGAGGCGAGGCAAGTACGAGGACCCTACTATGTCGTTTCAACTTCCTCTTCAGCTTGCCGCCGAGAGGGAAATTGCCAGACACCTTATTGGAGACCCGGGTTTCAGTTGGAATGTGTTTCTCAGGGAATTCGCGCACCCTTCCATGAGTCCTTTCTCTGCCGTGGGTTCAATTGGTCCCGCGTTTTTCCTCGCCATTGCCATGTTTAATTTTGTTCTTCAGATCAGCTCTTTGGTGACAGAGAAAGAGCTTAAACTTCGCCAGGCAATGACTATGATGGGCCTTTACGACTTTGCTTACTGGTCGTCCTGGCTCATTTGGGAGACGGTTGTCACAATCCTATCTGCCCTCCTCATAGTACTCTTTGGAATGATGTTCCAGTTCAGTTTTTTCTTGAAAAACAGTTTCGCGGTCCTGTTTGTTTTGTTCTTCCTATTTGAACTTAATATGACTGGCTTGGCCTTCATGTTATCTGCTTTCATTAAGAAGTCATCTTCGGCAACAACAATGGGATTCTCTATATTTATTGTGGGCTTTTTGACTCAGCTTGTGGTACAAGGAGGATTTCCTTACACGGATAATTTCTCCAAAACTTTACGAGATTTGTGGTCGTTATTCCCACCCAATCCTTTTTCTCAAGGTATACAAGTGCTTTCAGATGCAGTTGCAACTTCTGAAGACAATGGTGTTAGCTGGAGTAGACGAGGAGAATGTGCTCTTACTGATGCAGACTGCGTTATAACTATTGATGATATTTATAAATGGCTTGCGGCTACATTCGTTCTCTGGTTTGTTCTGGCCATTTACTTTGACAATATAATCCCAAATGCATCGGGTGTGAGGAAGTCAATATTCTACTTTCTAAATCCCGGTTATTGGTTGGGAAAAGGGGGTCAAAAAGTGAAAGAGGGTGGACTTTGTAGTTGTGTAGATTCAAACCCACGTCAGGAAATAAGTACACCTGATGATGAAGATGTCCTTGATGAAGAAAACAAAGTGAAACAGCAACTAACAGAAGGTCTGGTTGATACAAATATTGCTGTTCAAATGCATGGCCTTGCAAAGACCTATCCTGGTACACGTAACATTGGTTGCTGCTTCAAATGTAAAAAAACTGCTCCTTACACTGCCGTTAAGGGTTTGTGGGTGAACTTTGCAAAGGATCAGTTGTTTTGTCTTCTAGGACCCAACGGAGCTGGAAAAACGACAGCTATTAATTGTTTGACAGGGATAACTCCAGTAACTAACGGAGATGCGTTGATTTATGGACATTCAATCAGAAATTCTATAGGCATGTCAAATATTCGAAAGCTTATAGGAGTATGTCCACAGTTTGATATACTATGGGATGCACTGTCTGGCCAAGAACACCTCCAACTCTTTGCTACCATTAAAGGCCTGCCCCCAGCTTCCATAAAATCAATTACCCAGACTTCATTAGCAGAGGTGAAACTCACGGATGCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGAGGAATGAAACGCCGTCTCAGTGTTGCAATTGCCCTTATTGGTGACCCTAAGTTAGTCATTTTGGATGAACCGACCACTGGTATGGATCCAATAACAAGAAGGCATGTGTGGGACATAATTGAAAATGCAAAAAAAGGGCGTGCCATTGTTCTTACAACGCACTCTATGGAAGAAGCTGACATTCTAAGTGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAATCAGATTGAAATCACGCTTTGGTACTGGTTTTATTGCTAATCTCAGTTTCTTTGGAAACAATATTGAACGCAGTCCTACCAATGGAGATGCAATATCTACGGAGCATCGAGAGGAAGTGAAGAAATTCTTTAAGAATTATTTAAATGTTGAGCCAAAAGAGGAGACCAATAACTTCGTAACTTTTGTGATTCCCCATGACAGAGAGGCGCTCCTAACAAATTTCTTTTCGGAGCTACAAGATAGAGAAGAAGAATTTGGCATTTCTGACATCCAGCTTGGTCTTACAACTCTCGAAGAAGTTTTCTTGAATATTGCAAGACAAGCAGAGCTAGAAAATGCTACAGCCGAAGGGAGGCTAATAACCCTGACCTTAACATCTGGGGAATCTGTGCAGATTCCTGTAGGAGCTAGGTTTGTGGGAATTCCAGGAACACAGTCTGTGGAAAACCCAACTGGGTTTATGGTAGAAGTTTACTGGGAGCAAGATGATACAGGGGCCCTATGCATTGCTGGCCACTCGCAGAAGGTTCCTATTCCTCATGGCGTTCAATTATCATCCTCATTTTCTGCAAGACAACGTAGATATTTAGGCCGGGAAGGACCAATTCATGGGGTTGTGATTGATCCAAGTCAAGTTAGTCCAGGTGATTTTCAGCGATAA 2907 0.4455 MRTTLTGLPLVFQQFRALLKKNLLLSWRNKRATLLQLLSPLIFIFLIFAIDKAIKAQTSTSSAYKTVTDPPSLPSPPITPCEDKFFIKLPCYDFVWSGDQSPTFQTIVTRIMNNNPGRPIPPSKVKSFKDKTEVDAWLFSNPMRCPGALHFSQQNGTFISYGLQTNSTSLQRRGKYEDPTMSFQLPLQLAAEREIARHLIGDPGFSWNVFLREFAHPSMSPFSAVGSIGPAFFLAIAMFNFVLQISSLVTEKELKLRQAMTMMGLYDFAYWSSWLIWETVVTILSALLIVLFGMMFQFSFFLKNSFAVLFVLFFLFELNMTGLAFMLSAFIKKSSSATTMGFSIFIVGFLTQLVVQGGFPYTDNFSKTLRDLWSLFPPNPFSQGIQVLSDAVATSEDNGVSWSRRGECALTDADCVITIDDIYKWLAATFVLWFVLAIYFDNIIPNASGVRKSIFYFLNPGYWLGKGGQKVKEGGLCSCVDSNPRQEISTPDDEDVLDEENKVKQQLTEGLVDTNIAVQMHGLAKTYPGTRNIGCCFKCKKTAPYTAVKGLWVNFAKDQLFCLLGPNGAGKTTAINCLTGITPVTNGDALIYGHSIRNSIGMSNIRKLIGVCPQFDILWDALSGQEHLQLFATIKGLPPASIKSITQTSLAEVKLTDAAKVRAGSYSGGMKRRLSVAIALIGDPKLVILDEPTTGMDPITRRHVWDIIENAKKGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANLSFFGNNIERSPTNGDAISTEHREEVKKFFKNYLNVEPKEETNNFVTFVIPHDREALLTNFFSELQDREEEFGISDIQLGLTTLEEVFLNIARQAELENATAEGRLITLTLTSGESVQIPVGARFVGIPGTQSVENPTGFMVEVYWEQDDTGALCIAGHSQKVPIPHGVQLSSSFSARQRRYLGREGPIHGVVIDPSQVSPGDFQR 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02276 968 FunFam ABC transporter A family member 2 508 772 - -
Phco7g02276 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 544 746 IPR027417 -
Phco7g02276 968 Pfam ABC transporter 551 693 IPR003439 GO:0005524
Phco7g02276 968 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 518 764 IPR003439 GO:0005524
Phco7g02276 968 Pfam ABC-2 family transporter protein 32 439 IPR013525 GO:0016020|GO:0140359
Phco7g02276 968 ProSitePatterns ABC transporters family signature. 666 680 IPR017871 GO:0005524|GO:0016887
Phco7g02276 968 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 493 860 IPR026082 GO:0016020|GO:0055085|GO:0140359
Phco7g02276 968 CDD ABC_subfamily_A 518 752 - -
Phco7g02276 968 SMART AAA_5 557 741 IPR003593 GO:0016887
Phco7g02276 968 Gene3D - 518 762 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02276 Phco-Chr7 40090861 40096717 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02276 7 40090861 40096717 Phco7g02276 7 40090861 40096717 ECH