Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g02275 ATGGCAAACGAACCGGCGAGCTTCTGGACTCAGGCAAACGCACTCCTTAGGAAGAATTTAACCTTTCAGAAACGAAATGTTAAAACAAACGTTCGACTCATCATGTTCCCGTTCCTGTTGTGTCTGTTGCTGGTTCTGCTCCAACGCCTGGTGGATACTCAATTGGACAAGGCAGAGAACAAGTGTGGGTGCGTTTGTGTGAGGAGACAAGGGGACACGTGTGTGGAGGAGGAGTGCGGGCTTGAGCATTCGGATTTGGACCAAGTTTCCACCTGCGCTGTTCCCAATCCTCAGGAATGGCCTCCTCTGTTGCAAGTGCCGGCTCCACAGTACCGAGCTGTGAGAACAGACAATTTTCCCTTTTCCGATTATCCAAACGCCTCCTGCAGGAGGAATGGCTCCTGCCCTGTCACTATGCTCTTCACTGGCACAAATCAGTCTTTTGGAGAAGCCATATCTGGGAATATGATCCCAAGTTCCTTCACTATAAACAGCTCTGCTCTTATGGCTAGTTTGGCAGCAAATGTCGCTGGATCAGCCTCAATGACAGAGAACACCAATTTTCTGGAACCTGCTTTCTTTTCGGATGAACCTATTTATTATCTACAAAGTCAGTGCACGCAGAACTCCACATTTTCCATTTCTTTTGAGCTATCAGCAGCAACTAGCAGACAACAAGAGTTAGTCTGCGCTGAGGGTTTACGTTTATGGCGTAATAGTGCTTCTGAAGTGAACAATGAACTATATAGAGGCTATCGGAAAAGTAATCTAGAGGAACAAATCGAAGAGATAGCTGCAGGTTATGATTTTTTAAATTCAAATGGGAACATATTTAATGTCAGCATATGGTACAACTCCACCTACAAAAACGACACTGGTTCTACTCAAATTGCATTGGCGCGTATTCCTCGTTCTGTTAATTTGGTATCAGATGCCTACCTCCAGTTTCTGTTGGGACCTGGTACCAAAATGTTTTTTGAGTTTGTAAAGGAAATGCCAAAACCTTCAACCCCAATTAAATTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTATTGCCTTGACAACGCTAGTATATGAGAAGCAACAAAAATTAAGAATCATGATGAAAATGCATGGTCTTGGTGATGGGCCATATTGGATGATTTCGTATGGCTATTTTCTTGCCATATCAATTGTCTACATGCTGTGTTTTGTGATATTTGGCTCAGTCATAGGATTGAATTTCTTCACAATGAACGATTACAGCATCCAATTCGTGTTTTATTTTATCTATATAAATTTACAAATTGTACTGGCTTTTTTGCTGGCTTCCGCGTTTTCAAATGTTAAAACTGCTACAGTAATTTCATATATAGGTGTTTTTGGAACTGGGCTATTAGCTGGCTTTCTTTTCCAATTTTTTGTTCAAGACACATCATTTCCGAGAGGGTGGATCATTGTTATGGAGTTGTATCCTGGGTTTGCTTTATATCGTGGGTTATATGAGTTTTCGCAATATTCCTTTAGTGGGGATGCTTTGGGGACTAATGGTATGCGCTGGAGCGATCTGAGTGATAGCGCAAATGGCATGAAGGAGGTCTTAATTATAATGTTTGTGGAGTGGCTTCTGGTGCTTTTCTTTGCTTATTATATCGATCAAGTTTTGTCATCTGGAAGCAGAAAAAGTCCTCTTTTTTTCTTGAAAGGATTTCAGAAAAAGTCTCATTCATCTTTTCGGAAGCCTAGTATCCGAAGGCAGAAATCTAAGGTGTTTGTTCAGATGGAGAAACCTGATGTCACTCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAAACGACCATTAATCAAGCAATTGTATGCGACGACCTGAAAAAGGTCTACCCGGGGAGGGATGGTAACCCTGAGAAATTTGCAGTGAGAGGGTTGTCCCTTGCTTTGCCTCAAGGAGAATGCTTTGGTATGCTTGGTCCCAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCCGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTATGCCCACAGCATGATTTGCTGTGGGAATCTCTGACAGGAAGAGAGCATCTACTCTTTTATGGCAGACTTAAAAATCTTAAAGGTTCAGCCTTGACAGAAGCGGTGGAAGAATCGTTGAAAAGTGTAAACCTTTTTTATGGAGGAGTTGCAGATAAACAAGCTGGAAAATACAGTGGAGGAATGAAAAGGAGGCTTAGTGTCGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTGAAGCGTGCAAAACAAGATCGTGCAATCATTCTTACCACACATTCCATGGAAGAGGCAGAAGTCCTATGCGATCGATTAGGAATATTTGTAGATGGAAGCTTGCAGTGCATAGGAAACCCAAAGCAGTTGAAAGGTAGGTATGGAGGAAGTTATGTGTTCACAATGACAACATCTGTGGATGATGAAAAGGATGTAGAGAATTTGGTGCAAGGGCTTTCACCAAATGCTAACAAGATCTACCATATCTCTGGTACACAAAAGTTTGAGCTACCAAAGGAGGAGGTTAAAATAGCAAATGTATTCAAAGCAGTTGAAACTGCAAAGAGAAGCTTCACCGTTTCAGCATGGGGTTTAGCTGATACTACATTGGAAGATGTCTTTATCAAAGTTGCACGTGGGGCTCAGGCATTTGACACTTTGTCATAG 2838 0.4193 MANEPASFWTQANALLRKNLTFQKRNVKTNVRLIMFPFLLCLLLVLLQRLVDTQLDKAENKCGCVCVRRQGDTCVEEECGLEHSDLDQVSTCAVPNPQEWPPLLQVPAPQYRAVRTDNFPFSDYPNASCRRNGSCPVTMLFTGTNQSFGEAISGNMIPSSFTINSSALMASLAANVAGSASMTENTNFLEPAFFSDEPIYYLQSQCTQNSTFSISFELSAATSRQQELVCAEGLRLWRNSASEVNNELYRGYRKSNLEEQIEEIAAGYDFLNSNGNIFNVSIWYNSTYKNDTGSTQIALARIPRSVNLVSDAYLQFLLGPGTKMFFEFVKEMPKPSTPIKFDLASLLGGLFFTWVILQLFPIALTTLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISIVYMLCFVIFGSVIGLNFFTMNDYSIQFVFYFIYINLQIVLAFLLASAFSNVKTATVISYIGVFGTGLLAGFLFQFFVQDTSFPRGWIIVMELYPGFALYRGLYEFSQYSFSGDALGTNGMRWSDLSDSANGMKEVLIIMFVEWLLVLFFAYYIDQVLSSGSRKSPLFFLKGFQKKSHSSFRKPSIRRQKSKVFVQMEKPDVTQEREKVEQLLLETTINQAIVCDDLKKVYPGRDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTEAVEESLKSVNLFYGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKQLKGRYGGSYVFTMTTSVDDEKDVENLVQGLSPNANKIYHISGTQKFELPKEEVKIANVFKAVETAKRSFTVSAWGLADTTLEDVFIKVARGAQAFDTLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g02275 945 Coils Coil 254 274 - -
Phco7g02275 945 FunFam ABC transporter A family member 7 612 888 - -
Phco7g02275 945 Gene3D - 612 881 IPR027417 -
Phco7g02275 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 592 939 IPR026082 GO:0016020|GO:0055085|GO:0140359
Phco7g02275 945 SMART AAA_5 653 836 IPR003593 GO:0016887
Phco7g02275 945 CDD ABC_subfamily_A 627 848 - -
Phco7g02275 945 Pfam ABC transporter 645 789 IPR003439 GO:0005524
Phco7g02275 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Phco7g02275 945 Pfam ABC-2 family transporter protein 250 553 IPR013525 GO:0016020|GO:0140359
Phco7g02275 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Phco7g02275 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 860 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g02275 Phco-Chr7 40065469 40073092 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g02275 7 40065469 40073092 Phco7g02275 7 40065469 40073092 ECH